Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CDX1P47902 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CDX1P47902 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDX1P47902 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CDX1P47902 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CDX1P47902 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CDX1P47902 MIR506-201ENST00000384998 124 ntBASIC3.7□□□□□ -1.82
CDX1P47902 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CDX1P47902 AC016769.3-201ENST00000396562 315 ntBASIC3.7□□□□□ -1.82
CDX1P47902 SNRPEP2-201ENST00000397592 279 ntBASIC3.7□□□□□ -1.82
CDX1P47902 RPS3AP23-201ENST00000401762 784 ntBASIC3.7□□□□□ -1.82
CDX1P47902 AL121972.1-201ENST00000402023 252 ntBASIC3.7□□□□□ -1.82
CDX1P47902 AL024474.1-201ENST00000404655 591 ntBASIC3.7□□□□□ -1.82
CDX1P47902 RNU4-78P-201ENST00000410940 126 ntBASIC3.7□□□□□ -1.82
CDX1P47902 Z74021.1-201ENST00000423610 407 ntBASIC3.7□□□□□ -1.82
CDX1P47902 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.7□□□□□ -1.82
CDX1P47902 AC127537.2-201ENST00000439258 465 ntBASIC3.7□□□□□ -1.82
CDX1P47902 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.7□□□□□ -1.82
CDX1P47902 AC108078.3-201ENST00000502633 489 ntBASIC3.7□□□□□ -1.82
CDX1P47902 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.7□□□□□ -1.82
CDX1P47902 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.7□□□□□ -1.82
CDX1P47902 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.7□□□□□ -1.82
CDX1P47902 PARP4P3-201ENST00000510265 317 ntBASIC3.7□□□□□ -1.82
CDX1P47902 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.7□□□□□ -1.82
CDX1P47902 AC110760.3-202ENST00000515177 371 ntBASIC3.7□□□□□ -1.82
CDX1P47902 RNU6-311P-201ENST00000516224 102 ntBASIC3.7□□□□□ -1.82
CDX1P47902 RN7SKP31-201ENST00000516354 278 ntBASIC3.7□□□□□ -1.82
CDX1P47902 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.7□□□□□ -1.82
CDX1P47902 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.7□□□□□ -1.82
CDX1P47902 RFPL1S-203ENST00000539579 330 ntBASIC3.7□□□□□ -1.82
CDX1P47902 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.7□□□□□ -1.82
CDX1P47902 AL352979.3-201ENST00000553515 247 ntBASIC3.7□□□□□ -1.82
CDX1P47902 AL110118.1-201ENST00000553543 400 ntBASIC3.7□□□□□ -1.82
CDX1P47902 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.7□□□□□ -1.82
CDX1P47902 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.7□□□□□ -1.82
CDX1P47902 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.7□□□□□ -1.82
CDX1P47902 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.7□□□□□ -1.82
CDX1P47902 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.7□□□□□ -1.82
CDX1P47902 MIR4330-201ENST00000579077 105 ntBASIC3.7□□□□□ -1.82
CDX1P47902 RN7SL690P-201ENST00000582087 240 ntBASIC3.7□□□□□ -1.82
CDX1P47902 AL450336.1-201ENST00000605180 586 ntBASIC3.7□□□□□ -1.82
CDX1P47902 AC069209.1-201ENST00000619282 651 ntBASIC3.7□□□□□ -1.82
CDX1P47902 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.7□□□□□ -1.82
CDX1P47902 ZNF37BP-203ENST00000452306 1352 ntBASIC3.7□□□□□ -1.82
CDX1P47902 AL442639.1-201ENST00000625030 1899 ntBASIC3.7□□□□□ -1.82
CDX1P47902 AC025031.4-201ENST00000621248 3271 ntBASIC3.7□□□□□ -1.82
CDX1P47902 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDX1P47902 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.7□□□□□ -1.82
CDX1P47902 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDX1P47902 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDX1P47902 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDX1P47902 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDX1P47902 AC009643.2-201ENST00000603543 1448 ntBASIC3.7□□□□□ -1.82
CDX1P47902 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.7□□□□□ -1.82
CDX1P47902 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.7□□□□□ -1.82
CDX1P47902 AL133412.1-201ENST00000380194 2992 ntBASIC3.69□□□□□ -1.82
CDX1P47902 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.69□□□□□ -1.82
CDX1P47902 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CDX1P47902 RNU6-216P-201ENST00000363282 104 ntBASIC3.69□□□□□ -1.82
CDX1P47902 RNU6-263P-201ENST00000363811 107 ntBASIC3.69□□□□□ -1.82
CDX1P47902 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDX1P47902 RNU6-1242P-201ENST00000391052 103 ntBASIC3.69□□□□□ -1.82
CDX1P47902 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.69□□□□□ -1.82
CDX1P47902 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDX1P47902 AL049697.2-201ENST00000403708 294 ntBASIC3.69□□□□□ -1.82
CDX1P47902 RNA5SP80-201ENST00000410475 111 ntBASIC3.69□□□□□ -1.82
CDX1P47902 AL591848.1-201ENST00000413092 322 ntBASIC3.69□□□□□ -1.82
CDX1P47902 AL592310.1-201ENST00000414330 671 ntBASIC3.69□□□□□ -1.82
CDX1P47902 AL050321.1-201ENST00000432363 400 ntBASIC3.69□□□□□ -1.82
CDX1P47902 Z80107.1-201ENST00000436830 412 ntBASIC3.69□□□□□ -1.82
CDX1P47902 GSTA7P-201ENST00000438425 448 ntBASIC3.69□□□□□ -1.82
CDX1P47902 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.69□□□□□ -1.82
CDX1P47902 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.69□□□□□ -1.82
CDX1P47902 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDX1P47902 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.69□□□□□ -1.82
CDX1P47902 PABPC1P3-201ENST00000469174 459 ntBASIC3.69□□□□□ -1.82
CDX1P47902 RN7SL738P-201ENST00000470264 297 ntBASIC3.69□□□□□ -1.82
CDX1P47902 MTCO3P35-201ENST00000485582 781 ntBASIC3.69□□□□□ -1.82
CDX1P47902 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.69□□□□□ -1.82
CDX1P47902 AC008897.1-201ENST00000494006 347 ntBASIC3.69□□□□□ -1.82
CDX1P47902 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.69□□□□□ -1.82
CDX1P47902 AC093720.1-201ENST00000505681 714 ntBASIC3.69□□□□□ -1.82
CDX1P47902 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.69□□□□□ -1.82
CDX1P47902 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.69□□□□□ -1.82
CDX1P47902 AP003385.6-201ENST00000531603 374 ntBASIC3.69□□□□□ -1.82
CDX1P47902 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.69□□□□□ -1.82
CDX1P47902 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.69□□□□□ -1.82
CDX1P47902 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.69□□□□□ -1.82
CDX1P47902 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.69□□□□□ -1.82
CDX1P47902 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.69□□□□□ -1.82
CDX1P47902 CCDC58P3-201ENST00000590792 430 ntBASIC3.69□□□□□ -1.82
CDX1P47902 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDX1P47902 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CDX1P47902 DUXAP3-201ENST00000603616 594 ntBASIC3.69□□□□□ -1.82
CDX1P47902 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.69□□□□□ -1.82
CDX1P47902 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.69□□□□□ -1.82
CDX1P47902 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.69□□□□□ -1.82
CDX1P47902 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.69□□□□□ -1.82
CDX1P47902 AC019193.2-201ENST00000610012 634 ntBASIC3.69□□□□□ -1.82
CDX1P47902 AC109809.1-201ENST00000619665 545 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms