Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 LAP3P1-201ENST00000403648 294 ntBASIC4.43□□□□□ -1.7
USP6P35125 AC126124.2-201ENST00000413542 321 ntBASIC4.43□□□□□ -1.7
USP6P35125 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
USP6P35125 MRPS33P4-201ENST00000434892 317 ntBASIC4.43□□□□□ -1.7
USP6P35125 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.43□□□□□ -1.7
USP6P35125 AC107083.1-201ENST00000439643 279 ntBASIC4.43□□□□□ -1.7
USP6P35125 HMGB3P9-201ENST00000441799 583 ntBASIC4.43□□□□□ -1.7
USP6P35125 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.43□□□□□ -1.7
USP6P35125 RPL23AP71-201ENST00000470966 469 ntBASIC4.43□□□□□ -1.7
USP6P35125 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USP6P35125 ACTG1P13-201ENST00000486987 1043 ntBASIC4.43□□□□□ -1.7
USP6P35125 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.43□□□□□ -1.7
USP6P35125 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.43□□□□□ -1.7
USP6P35125 SNORA70.19-201ENST00000516717 90 ntBASIC4.43□□□□□ -1.7
USP6P35125 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.43□□□□□ -1.7
USP6P35125 AP000859.1-201ENST00000525536 307 ntBASIC4.43□□□□□ -1.7
USP6P35125 AC006518.1-201ENST00000541449 943 ntBASIC4.43□□□□□ -1.7
USP6P35125 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.43□□□□□ -1.7
USP6P35125 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.43□□□□□ -1.7
USP6P35125 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.43□□□□□ -1.7
USP6P35125 AC006946.3-201ENST00000609791 756 ntBASIC4.43□□□□□ -1.7
USP6P35125 AC009032.1-201ENST00000617574 431 ntBASIC4.43□□□□□ -1.7
USP6P35125 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.43□□□□□ -1.7
USP6P35125 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP6P35125 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.43□□□□□ -1.7
USP6P35125 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USP6P35125 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.42□□□□□ -1.7
USP6P35125 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
USP6P35125 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.42□□□□□ -1.7
USP6P35125 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP6P35125 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.42□□□□□ -1.7
USP6P35125 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP6P35125 RNU6-1251P-201ENST00000364502 107 ntBASIC4.42□□□□□ -1.7
USP6P35125 RNU1-89P-201ENST00000384592 164 ntBASIC4.42□□□□□ -1.7
USP6P35125 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
USP6P35125 HMGB3P18-201ENST00000406327 590 ntBASIC4.42□□□□□ -1.7
USP6P35125 RNU2-22P-201ENST00000411266 212 ntBASIC4.42□□□□□ -1.7
USP6P35125 AC007899.1-201ENST00000412776 775 ntBASIC4.42□□□□□ -1.7
USP6P35125 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
USP6P35125 AL512504.1-201ENST00000415494 778 ntBASIC4.42□□□□□ -1.7
USP6P35125 AC012065.2-201ENST00000421295 375 ntBASIC4.42□□□□□ -1.7
USP6P35125 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.42□□□□□ -1.7
USP6P35125 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.42□□□□□ -1.7
USP6P35125 AC114878.1-201ENST00000441166 358 ntBASIC4.42□□□□□ -1.7
USP6P35125 RPL7P48-201ENST00000461513 746 ntBASIC4.42□□□□□ -1.7
USP6P35125 PCNAP1-201ENST00000505363 709 ntBASIC4.42□□□□□ -1.7
USP6P35125 AC008885.1-201ENST00000514930 301 ntBASIC4.42□□□□□ -1.7
USP6P35125 AC067904.2-201ENST00000517322 1283 ntBASIC4.42□□□□□ -1.7
USP6P35125 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.42□□□□□ -1.7
USP6P35125 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.42□□□□□ -1.7
USP6P35125 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.42□□□□□ -1.7
USP6P35125 MIR7106-201ENST00000612419 65 ntBASIC4.42□□□□□ -1.7
USP6P35125 AL713922.2-201ENST00000619384 716 ntBASIC4.42□□□□□ -1.7
USP6P35125 AC018692.3-201ENST00000623929 123 ntBASIC4.42□□□□□ -1.7
USP6P35125 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.42□□□□□ -1.7
USP6P35125 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.42□□□□□ -1.7
USP6P35125 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
USP6P35125 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.42□□□□□ -1.7
USP6P35125 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
USP6P35125 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP6P35125 AC017071.1-201ENST00000564407 2204 ntBASIC4.41□□□□□ -1.7
USP6P35125 HSPA8P17-201ENST00000427029 1382 ntBASIC4.41□□□□□ -1.7
USP6P35125 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP6P35125 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP6P35125 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP6P35125 MIR421-201ENST00000365696 85 ntBASIC4.41□□□□□ -1.7
USP6P35125 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.41□□□□□ -1.7
USP6P35125 AC002075.2-201ENST00000425207 252 ntBASIC4.41□□□□□ -1.7
USP6P35125 RPL7P28-201ENST00000437739 740 ntBASIC4.41□□□□□ -1.7
USP6P35125 ARL5AP3-201ENST00000439327 386 ntBASIC4.41□□□□□ -1.7
USP6P35125 MTND2P3-201ENST00000452458 470 ntBASIC4.41□□□□□ -1.7
USP6P35125 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP6P35125 AC099560.2-201ENST00000457554 255 ntBASIC4.41□□□□□ -1.7
USP6P35125 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.41□□□□□ -1.7
USP6P35125 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.41□□□□□ -1.7
USP6P35125 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.41□□□□□ -1.7
USP6P35125 AC118465.1-201ENST00000513820 1271 ntBASIC4.41□□□□□ -1.7
USP6P35125 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.41□□□□□ -1.7
USP6P35125 RNU6-491P-201ENST00000516099 110 ntBASIC4.41□□□□□ -1.7
USP6P35125 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.41□□□□□ -1.7
USP6P35125 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.41□□□□□ -1.7
USP6P35125 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.41□□□□□ -1.7
USP6P35125 AC005242.1-201ENST00000585658 438 ntBASIC4.41□□□□□ -1.7
USP6P35125 MIR6715A-201ENST00000615929 79 ntBASIC4.41□□□□□ -1.7
USP6P35125 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
USP6P35125 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP6P35125 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.41□□□□□ -1.7
USP6P35125 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
USP6P35125 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
USP6P35125 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.41□□□□□ -1.7
USP6P35125 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.41□□□□□ -1.7
USP6P35125 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
USP6P35125 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
USP6P35125 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.4□□□□□ -1.7
USP6P35125 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
USP6P35125 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
USP6P35125 CEP170P1-201ENST00000502249 4587 ntBASIC4.4□□□□□ -1.7
USP6P35125 RNU6-1320P-201ENST00000390838 107 ntBASIC4.4□□□□□ -1.7
USP6P35125 RNU6-1269P-201ENST00000391139 107 ntBASIC4.4□□□□□ -1.7
USP6P35125 AL138885.1-201ENST00000405921 675 ntBASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms