Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC3.65□□□□□ -1.83
HOXA6P31267 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXA6P31267 OR5M7P-201ENST00000526140 972 ntBASIC3.65□□□□□ -1.83
HOXA6P31267 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.65□□□□□ -1.83
HOXA6P31267 AC106785.3-201ENST00000564064 847 ntBASIC3.65□□□□□ -1.83
HOXA6P31267 AC012493.2-201ENST00000595083 291 ntBASIC3.65□□□□□ -1.83
HOXA6P31267 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.65□□□□□ -1.83
HOXA6P31267 AL133247.2-201ENST00000603236 482 ntBASIC3.65□□□□□ -1.83
HOXA6P31267 AP000255.1-201ENST00000610276 676 ntBASIC3.65□□□□□ -1.83
HOXA6P31267 AC135507.2-201ENST00000612443 309 ntBASIC3.65□□□□□ -1.83
HOXA6P31267 AL133370.2-201ENST00000619934 439 ntBASIC3.65□□□□□ -1.83
HOXA6P31267 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
HOXA6P31267 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXA6P31267 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HOXA6P31267 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXA6P31267 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HOXA6P31267 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXA6P31267 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXA6P31267 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXA6P31267 MTCO3P31-201ENST00000405526 789 ntBASIC3.64□□□□□ -1.83
HOXA6P31267 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.64□□□□□ -1.83
HOXA6P31267 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA6P31267 MTND2P25-201ENST00000449028 610 ntBASIC3.64□□□□□ -1.83
HOXA6P31267 SLC31A1P1-201ENST00000451221 567 ntBASIC3.64□□□□□ -1.83
HOXA6P31267 AC078918.1-201ENST00000498515 228 ntBASIC3.64□□□□□ -1.83
HOXA6P31267 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXA6P31267 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.64□□□□□ -1.83
HOXA6P31267 AL121766.1-201ENST00000547436 487 ntBASIC3.64□□□□□ -1.83
HOXA6P31267 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA6P31267 AC090877.1-201ENST00000561418 344 ntBASIC3.64□□□□□ -1.83
HOXA6P31267 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA6P31267 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.64□□□□□ -1.83
HOXA6P31267 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA6P31267 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.64□□□□□ -1.83
HOXA6P31267 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.64□□□□□ -1.83
HOXA6P31267 AL163642.2-201ENST00000604722 1019 ntBASIC3.64□□□□□ -1.83
HOXA6P31267 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.64□□□□□ -1.83
HOXA6P31267 AC022079.2-201ENST00000619739 566 ntBASIC3.64□□□□□ -1.83
HOXA6P31267 AC095038.2-201ENST00000621464 1070 ntBASIC3.64□□□□□ -1.83
HOXA6P31267 AC006065.5-201ENST00000623427 349 ntBASIC3.64□□□□□ -1.83
HOXA6P31267 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXA6P31267 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXA6P31267 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXA6P31267 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXA6P31267 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.64□□□□□ -1.83
HOXA6P31267 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HOXA6P31267 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXA6P31267 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
HOXA6P31267 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA6P31267 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
HOXA6P31267 AC005183.1-201ENST00000603687 1979 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA6P31267 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.63□□□□□ -1.83
HOXA6P31267 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA6P31267 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA6P31267 RNU6-666P-201ENST00000363499 107 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.63□□□□□ -1.83
HOXA6P31267 RNU6-167P-201ENST00000384292 106 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 RNU6-532P-201ENST00000384318 107 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 MIR128-1-201ENST00000384921 82 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.63□□□□□ -1.83
HOXA6P31267 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA6P31267 JKAMPP1-201ENST00000413804 919 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 AL031736.2-201ENST00000426573 787 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 HIGD1AP12-201ENST00000427832 281 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 AC008065.1-201ENST00000428525 348 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 AL035458.1-201ENST00000433096 585 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 HLA-N-201ENST00000437516 135 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXA6P31267 ELOCP8-201ENST00000439309 332 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 ELOCP15-201ENST00000442090 332 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 HMGN2P21-201ENST00000447764 270 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXA6P31267 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXA6P31267 AL049873.1-201ENST00000480540 376 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA6P31267 MTATP6P22-201ENST00000507369 598 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXA6P31267 AC010285.3-201ENST00000511668 676 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXA6P31267 RNU4-18P-201ENST00000516751 149 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXA6P31267 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.63□□□□□ -1.83
HOXA6P31267 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.63□□□□□ -1.83
HOXA6P31267 MIMT1-201ENST00000597105 1050 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXA6P31267 AL513477.2-201ENST00000607858 568 ntBASIC3.63□□□□□ -1.83
HOXA6P31267 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXA6P31267 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HOXA6P31267 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA6P31267 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA6P31267 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXA6P31267 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA6P31267 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA6P31267 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA6P31267 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA6P31267 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA6P31267 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXA6P31267 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms