Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 SNORA70C-201ENST00000384538 135 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 MIR141-201ENST00000384975 95 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 HMGB3P20-201ENST00000417997 600 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.26□□□□□ -1.89
CD40LGP29965 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.26□□□□□ -1.89
CD40LGP29965 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CD40LGP29965 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.26□□□□□ -1.89
CD40LGP29965 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.26□□□□□ -1.89
CD40LGP29965 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.26□□□□□ -1.89
CD40LGP29965 HMGB1P5-202ENST00000451497 985 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 AC009220.1-201ENST00000451614 275 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 HMGN1P18-201ENST00000457642 277 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 AC010618.1-201ENST00000469924 477 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 AC104689.1-201ENST00000473356 768 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 RN7SL860P-201ENST00000473738 223 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 AC107398.1-201ENST00000486904 505 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
CD40LGP29965 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.26□□□□□ -1.89
CD40LGP29965 AC111193.1-201ENST00000504097 155 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.26□□□□□ -1.89
CD40LGP29965 AC008562.1-201ENST00000521763 330 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 AC104027.1-201ENST00000521887 300 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 COX6B1P6-201ENST00000522347 255 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 AP003730.1-201ENST00000524605 285 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CD40LGP29965 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.26□□□□□ -1.89
CD40LGP29965 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CD40LGP29965 AC068831.4-201ENST00000556118 109 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 AC006960.3-201ENST00000561845 705 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 AGGF1P6-201ENST00000569213 976 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 AP005901.4-201ENST00000577336 569 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 AC009303.3-201ENST00000591103 736 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 AL161729.3-201ENST00000603533 673 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
CD40LGP29965 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.26□□□□□ -1.89
CD40LGP29965 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CD40LGP29965 AC022149.2-201ENST00000621061 203 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 AC010608.2-201ENST00000624830 470 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.26□□□□□ -1.89
CD40LGP29965 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.26□□□□□ -1.89
CD40LGP29965 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.26□□□□□ -1.89
CD40LGP29965 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CD40LGP29965 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
CD40LGP29965 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CD40LGP29965 AC068647.1-201ENST00000489539 2265 ntBASIC3.26□□□□□ -1.89
CD40LGP29965 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD40LGP29965 LARP1BP1-201ENST00000506036 1359 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 AC123912.3-201ENST00000600907 1367 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CD40LGP29965 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CD40LGP29965 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD40LGP29965 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.25□□□□□ -1.89
CD40LGP29965 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CD40LGP29965 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CD40LGP29965 RPL32P3-201ENST00000359025 275 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 MIR148B-201ENST00000362252 99 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.25□□□□□ -1.89
CD40LGP29965 SNORA56-201ENST00000383966 129 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
CD40LGP29965 RANP4-201ENST00000413361 655 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.25□□□□□ -1.89
CD40LGP29965 OR5BE1P-201ENST00000425977 939 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 MRPS18BP2-201ENST00000434310 759 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 Z85994.2-201ENST00000434327 452 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.25□□□□□ -1.89
CD40LGP29965 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.25□□□□□ -1.89
CD40LGP29965 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CD40LGP29965 AC114755.5-201ENST00000447760 831 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 RN7SL385P-201ENST00000468873 276 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 MTND3P6-201ENST00000485242 339 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD40LGP29965 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.25□□□□□ -1.89
CD40LGP29965 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.25□□□□□ -1.89
CD40LGP29965 RNU6-491P-201ENST00000516099 110 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.25□□□□□ -1.89
CD40LGP29965 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.25□□□□□ -1.89
CD40LGP29965 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD40LGP29965 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.25□□□□□ -1.89
CD40LGP29965 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.25□□□□□ -1.89
CD40LGP29965 AC119501.1-201ENST00000603646 475 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 AL163642.2-201ENST00000604722 1019 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 RNU4-89P-201ENST00000607443 133 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 AL445423.1-201ENST00000609941 536 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.25□□□□□ -1.89
CD40LGP29965 AC112484.5-201ENST00000624189 228 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 AC090506.2-201ENST00000624521 419 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 OR5BE1P-202ENST00000641168 1176 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD40LGP29965 AC007496.3-201ENST00000624987 3443 ntBASIC3.25□□□□□ -1.89
CD40LGP29965 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.25□□□□□ -1.89
CD40LGP29965 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD40LGP29965 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CD40LGP29965 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CD40LGP29965 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CD40LGP29965 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.24□□□□□ -1.89
CD40LGP29965 XPOTP1-201ENST00000443317 2398 ntBASIC3.24□□□□□ -1.89
CD40LGP29965 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.24□□□□□ -1.89
CD40LGP29965 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CD40LGP29965 RN7SKP227-201ENST00000364445 330 ntBASIC3.24□□□□□ -1.89
CD40LGP29965 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms