Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 RNA5SP513-201ENST00000364648 118 ntBASIC4.61□□□□□ -1.67
BDNFP23560 RNA5SP366-201ENST00000365454 123 ntBASIC4.61□□□□□ -1.67
BDNFP23560 MCTS2P-201ENST00000394552 546 ntBASIC4.61□□□□□ -1.67
BDNFP23560 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.61□□□□□ -1.67
BDNFP23560 AL136133.1-201ENST00000413694 376 ntBASIC4.61□□□□□ -1.67
BDNFP23560 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.61□□□□□ -1.67
BDNFP23560 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.61□□□□□ -1.67
BDNFP23560 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
BDNFP23560 RPEP2-201ENST00000432149 701 ntBASIC4.61□□□□□ -1.67
BDNFP23560 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.61□□□□□ -1.67
BDNFP23560 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.61□□□□□ -1.67
BDNFP23560 AC127537.2-201ENST00000439258 465 ntBASIC4.61□□□□□ -1.67
BDNFP23560 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.61□□□□□ -1.67
BDNFP23560 NUTF2P3-201ENST00000448540 384 ntBASIC4.61□□□□□ -1.67
BDNFP23560 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.61□□□□□ -1.67
BDNFP23560 PNPLA4P1-201ENST00000458328 305 ntBASIC4.61□□□□□ -1.67
BDNFP23560 AC010285.1-201ENST00000470580 392 ntBASIC4.61□□□□□ -1.67
BDNFP23560 AL136126.1-201ENST00000473603 402 ntBASIC4.61□□□□□ -1.67
BDNFP23560 AC013828.1-201ENST00000481845 158 ntBASIC4.61□□□□□ -1.67
BDNFP23560 AC041039.1-201ENST00000485656 536 ntBASIC4.61□□□□□ -1.67
BDNFP23560 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.61□□□□□ -1.67
BDNFP23560 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.61□□□□□ -1.67
BDNFP23560 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.61□□□□□ -1.67
BDNFP23560 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.61□□□□□ -1.67
BDNFP23560 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.61□□□□□ -1.67
BDNFP23560 RN7SKP244-201ENST00000516513 307 ntBASIC4.61□□□□□ -1.67
BDNFP23560 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.61□□□□□ -1.67
BDNFP23560 CYCSP29-201ENST00000533731 318 ntBASIC4.61□□□□□ -1.67
BDNFP23560 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.61□□□□□ -1.67
BDNFP23560 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.61□□□□□ -1.67
BDNFP23560 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.61□□□□□ -1.67
BDNFP23560 AC090079.2-201ENST00000575289 768 ntBASIC4.61□□□□□ -1.67
BDNFP23560 AC090666.1-201ENST00000578241 445 ntBASIC4.61□□□□□ -1.67
BDNFP23560 AC010201.1-201ENST00000605051 540 ntBASIC4.61□□□□□ -1.67
BDNFP23560 Z98200.1-201ENST00000607298 470 ntBASIC4.61□□□□□ -1.67
BDNFP23560 SNORD91B-202ENST00000608459 222 ntBASIC4.61□□□□□ -1.67
BDNFP23560 AC092954.1-201ENST00000609121 445 ntBASIC4.61□□□□□ -1.67
BDNFP23560 AC018645.2-201ENST00000609151 472 ntBASIC4.61□□□□□ -1.67
BDNFP23560 AC097505.1-201ENST00000610199 565 ntBASIC4.61□□□□□ -1.67
BDNFP23560 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.61□□□□□ -1.67
BDNFP23560 AC007546.2-201ENST00000623996 360 ntBASIC4.61□□□□□ -1.67
BDNFP23560 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
BDNFP23560 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BDNFP23560 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.61□□□□□ -1.67
BDNFP23560 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
BDNFP23560 NUP58P1-201ENST00000502546 1738 ntBASIC4.6□□□□□ -1.67
BDNFP23560 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
BDNFP23560 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.6□□□□□ -1.67
BDNFP23560 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.6□□□□□ -1.67
BDNFP23560 AC244517.1-201ENST00000606030 2086 ntBASIC4.6□□□□□ -1.67
BDNFP23560 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.6□□□□□ -1.67
BDNFP23560 AP001148.1-201ENST00000624124 2359 ntBASIC4.6□□□□□ -1.67
BDNFP23560 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
BDNFP23560 SUGT1P1-201ENST00000379514 476 ntBASIC4.6□□□□□ -1.67
BDNFP23560 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
BDNFP23560 SNORA51.6-201ENST00000384151 125 ntBASIC4.6□□□□□ -1.67
BDNFP23560 AC096533.1-201ENST00000411645 353 ntBASIC4.6□□□□□ -1.67
BDNFP23560 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BDNFP23560 AC092634.6-201ENST00000418558 192 ntBASIC4.6□□□□□ -1.67
BDNFP23560 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.6□□□□□ -1.67
BDNFP23560 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.6□□□□□ -1.67
BDNFP23560 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.6□□□□□ -1.67
BDNFP23560 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.6□□□□□ -1.67
BDNFP23560 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.6□□□□□ -1.67
BDNFP23560 HMGB1P16-201ENST00000447155 540 ntBASIC4.6□□□□□ -1.67
BDNFP23560 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BDNFP23560 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.6□□□□□ -1.67
BDNFP23560 FABP3P2-201ENST00000453169 399 ntBASIC4.6□□□□□ -1.67
BDNFP23560 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.6□□□□□ -1.67
BDNFP23560 ATP5G1P3-201ENST00000463301 410 ntBASIC4.6□□□□□ -1.67
BDNFP23560 RPL6P9-201ENST00000466502 859 ntBASIC4.6□□□□□ -1.67
BDNFP23560 PABPC1P3-201ENST00000469174 459 ntBASIC4.6□□□□□ -1.67
BDNFP23560 AC105137.1-201ENST00000484355 562 ntBASIC4.6□□□□□ -1.67
BDNFP23560 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BDNFP23560 AC091167.1-201ENST00000492017 396 ntBASIC4.6□□□□□ -1.67
BDNFP23560 CAB39P1-201ENST00000502277 460 ntBASIC4.6□□□□□ -1.67
BDNFP23560 PARP4P3-201ENST00000510265 317 ntBASIC4.6□□□□□ -1.67
BDNFP23560 MTCYBP37-201ENST00000510642 1133 ntBASIC4.6□□□□□ -1.67
BDNFP23560 SNORA31.20-201ENST00000517111 133 ntBASIC4.6□□□□□ -1.67
BDNFP23560 OR8I1P-201ENST00000529291 931 ntBASIC4.6□□□□□ -1.67
BDNFP23560 DEFB130C-202ENST00000530001 230 ntBASIC4.6□□□□□ -1.67
BDNFP23560 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BDNFP23560 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
BDNFP23560 AC136624.4-201ENST00000573044 370 ntBASIC4.6□□□□□ -1.67
BDNFP23560 AL163642.2-201ENST00000604722 1019 ntBASIC4.6□□□□□ -1.67
BDNFP23560 AL021997.2-201ENST00000615674 271 ntBASIC4.6□□□□□ -1.67
BDNFP23560 AL445567.2-201ENST00000618935 498 ntBASIC4.6□□□□□ -1.67
BDNFP23560 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.6□□□□□ -1.67
BDNFP23560 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BDNFP23560 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
BDNFP23560 AC005086.4-201ENST00000623065 213 ntBASIC4.6□□□□□ -1.67
BDNFP23560 FP325313.1-201ENST00000638228 703 ntBASIC4.6□□□□□ -1.67
BDNFP23560 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
BDNFP23560 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BDNFP23560 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.6□□□□□ -1.67
BDNFP23560 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
BDNFP23560 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.6□□□□□ -1.67
BDNFP23560 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.6□□□□□ -1.67
BDNFP23560 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.6□□□□□ -1.67
BDNFP23560 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms