Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 RPL21P71-201ENST00000465598 459 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 AC013828.1-201ENST00000481845 158 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 AC012170.1-201ENST00000495139 359 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC6.24□□□□□ -1.41
LMNB1P20700 AC010342.1-201ENST00000514047 877 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 RNU6-202P-201ENST00000515998 96 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.24□□□□□ -1.41
LMNB1P20700 MTCO2P4-201ENST00000517968 247 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
LMNB1P20700 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC6.24□□□□□ -1.41
LMNB1P20700 AC090502.2-201ENST00000549267 280 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.24□□□□□ -1.41
LMNB1P20700 EIF5A2P1-201ENST00000564027 460 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC6.24□□□□□ -1.41
LMNB1P20700 AC122134.1-201ENST00000565664 1104 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 AC137800.2-201ENST00000574375 120 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.24□□□□□ -1.41
LMNB1P20700 AC009977.1-201ENST00000586015 570 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.24□□□□□ -1.41
LMNB1P20700 BNIP3P23-201ENST00000599655 511 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 AC112191.3-201ENST00000604371 277 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 AC008945.2-201ENST00000606056 604 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 AC009994.1-201ENST00000606889 253 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 AP001506.1-201ENST00000615444 211 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
LMNB1P20700 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.24□□□□□ -1.41
LMNB1P20700 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
LMNB1P20700 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
LMNB1P20700 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LMNB1P20700 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
LMNB1P20700 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.24□□□□□ -1.41
LMNB1P20700 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.24□□□□□ -1.41
LMNB1P20700 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
LMNB1P20700 AC139713.2-214ENST00000642059 1811 ntBASIC6.24□□□□□ -1.41
LMNB1P20700 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
LMNB1P20700 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LMNB1P20700 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
LMNB1P20700 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.24□□□□□ -1.41
LMNB1P20700 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LMNB1P20700 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
LMNB1P20700 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LMNB1P20700 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LMNB1P20700 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LMNB1P20700 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
LMNB1P20700 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.23□□□□□ -1.41
LMNB1P20700 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
LMNB1P20700 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
LMNB1P20700 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
LMNB1P20700 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
LMNB1P20700 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
LMNB1P20700 Y_RNA.9-201ENST00000362354 101 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LMNB1P20700 RPS3AP3-201ENST00000411933 242 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 C1DP2-201ENST00000418167 426 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 AC069157.1-201ENST00000421749 137 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC6.23□□□□□ -1.41
LMNB1P20700 AC073464.1-201ENST00000429823 534 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.23□□□□□ -1.41
LMNB1P20700 OFD1P4Y-201ENST00000455273 1179 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 snoU109.1-201ENST00000459339 135 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LMNB1P20700 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC6.23□□□□□ -1.41
LMNB1P20700 RN7SL604P-201ENST00000492589 296 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 AC021678.1-201ENST00000505195 936 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC6.23□□□□□ -1.41
LMNB1P20700 GLUD1P3-202ENST00000508551 200 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC6.23□□□□□ -1.41
LMNB1P20700 MTND5P4-201ENST00000514978 288 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 RN7SKP276-201ENST00000516242 268 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.23□□□□□ -1.41
LMNB1P20700 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.23□□□□□ -1.41
LMNB1P20700 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.23□□□□□ -1.41
LMNB1P20700 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6.23□□□□□ -1.41
LMNB1P20700 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.23□□□□□ -1.41
LMNB1P20700 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC6.23□□□□□ -1.41
LMNB1P20700 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LMNB1P20700 AC008687.2-201ENST00000597865 520 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.23□□□□□ -1.41
LMNB1P20700 AL356218.2-201ENST00000605264 187 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.23□□□□□ -1.41
LMNB1P20700 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
LMNB1P20700 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
LMNB1P20700 LINC00561-201ENST00000565815 2738 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LMNB1P20700 STX3-208ENST00000641815 3236 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
LMNB1P20700 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
LMNB1P20700 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LMNB1P20700 BCORP1-203ENST00000513194 5093 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
LMNB1P20700 AC010266.2-201ENST00000564741 3255 ntBASIC6.23□□□□□ -1.41
LMNB1P20700 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LMNB1P20700 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LMNB1P20700 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
LMNB1P20700 AC016745.2-201ENST00000608834 3443 ntBASIC6.22□□□□□ -1.41
LMNB1P20700 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.22□□□□□ -1.41
LMNB1P20700 RNU6-1090P-201ENST00000364065 94 ntBASIC6.22□□□□□ -1.41
LMNB1P20700 RNA5SP515-201ENST00000364570 118 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms