Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.57□□□□□ -2
CCL3L1P16619 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.57□□□□□ -2
CCL3L1P16619 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.57□□□□□ -2
CCL3L1P16619 OR6R2P-201ENST00000609216 300 ntBASIC2.57□□□□□ -2
CCL3L1P16619 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC2.57□□□□□ -2
CCL3L1P16619 ELL2P4-201ENST00000446870 1376 ntBASIC2.57□□□□□ -2
CCL3L1P16619 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CCL3L1P16619 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.57□□□□□ -2
CCL3L1P16619 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCL3L1P16619 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCL3L1P16619 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCL3L1P16619 SRP72P2-201ENST00000344851 1979 ntBASIC2.56□□□□□ -2
CCL3L1P16619 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCL3L1P16619 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC2.56□□□□□ -2
CCL3L1P16619 RNA5SP383-201ENST00000362934 120 ntBASIC2.56□□□□□ -2
CCL3L1P16619 RNA5SP374-201ENST00000362939 125 ntBASIC2.56□□□□□ -2
CCL3L1P16619 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.56□□□□□ -2
CCL3L1P16619 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.56□□□□□ -2
CCL3L1P16619 SNORA7.4-201ENST00000384249 137 ntBASIC2.56□□□□□ -2
CCL3L1P16619 AL034403.1-201ENST00000399414 885 ntBASIC2.56□□□□□ -2
CCL3L1P16619 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCL3L1P16619 MTND4LP13-201ENST00000425022 298 ntBASIC2.56□□□□□ -2
CCL3L1P16619 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCL3L1P16619 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCL3L1P16619 AC006946.1-201ENST00000429106 328 ntBASIC2.56□□□□□ -2
CCL3L1P16619 AC016696.1-201ENST00000446949 318 ntBASIC2.56□□□□□ -2
CCL3L1P16619 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC2.56□□□□□ -2
CCL3L1P16619 ST13P14-201ENST00000474095 734 ntBASIC2.56□□□□□ -2
CCL3L1P16619 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.56□□□□□ -2
CCL3L1P16619 AC006445.1-201ENST00000491925 405 ntBASIC2.56□□□□□ -2
CCL3L1P16619 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.56□□□□□ -2
CCL3L1P16619 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.56□□□□□ -2
CCL3L1P16619 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC2.56□□□□□ -2
CCL3L1P16619 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.56□□□□□ -2
CCL3L1P16619 RNU6-1231P-201ENST00000517185 103 ntBASIC2.56□□□□□ -2
CCL3L1P16619 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC2.56□□□□□ -2
CCL3L1P16619 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.56□□□□□ -2
CCL3L1P16619 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC2.56□□□□□ -2
CCL3L1P16619 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.56□□□□□ -2
CCL3L1P16619 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.56□□□□□ -2
CCL3L1P16619 MIR5004-201ENST00000579078 107 ntBASIC2.56□□□□□ -2
CCL3L1P16619 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.56□□□□□ -2
CCL3L1P16619 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.56□□□□□ -2
CCL3L1P16619 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.56□□□□□ -2
CCL3L1P16619 AC110741.2-201ENST00000605278 268 ntBASIC2.56□□□□□ -2
CCL3L1P16619 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.56□□□□□ -2
CCL3L1P16619 MIR3651-201ENST00000630427 90 ntBASIC2.56□□□□□ -2
CCL3L1P16619 AC107081.3-201ENST00000612715 2034 ntBASIC2.56□□□□□ -2
CCL3L1P16619 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC2.56□□□□□ -2
CCL3L1P16619 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CCL3L1P16619 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CCL3L1P16619 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCL3L1P16619 Y_RNA.333-201ENST00000365274 102 ntBASIC2.55□□□□□ -2
CCL3L1P16619 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CCL3L1P16619 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.55□□□□□ -2
CCL3L1P16619 SNORD15B-201ENST00000384714 146 ntBASIC2.55□□□□□ -2
CCL3L1P16619 GSTA8P-201ENST00000404253 637 ntBASIC2.55□□□□□ -2
CCL3L1P16619 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.55□□□□□ -2
CCL3L1P16619 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.55□□□□□ -2
CCL3L1P16619 AL592437.2-201ENST00000421655 2434 ntBASIC2.55□□□□□ -2
CCL3L1P16619 AL512649.1-201ENST00000428997 581 ntBASIC2.55□□□□□ -2
CCL3L1P16619 RPL23AP69-201ENST00000431134 458 ntBASIC2.55□□□□□ -2
CCL3L1P16619 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.55□□□□□ -2
CCL3L1P16619 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.55□□□□□ -2
CCL3L1P16619 BTG3P1-201ENST00000435859 716 ntBASIC2.55□□□□□ -2
CCL3L1P16619 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.55□□□□□ -2
CCL3L1P16619 TXNP1-201ENST00000441872 371 ntBASIC2.55□□□□□ -2
CCL3L1P16619 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.55□□□□□ -2
CCL3L1P16619 HMGB3P6-201ENST00000444896 598 ntBASIC2.55□□□□□ -2
CCL3L1P16619 CASP3P1-201ENST00000446037 609 ntBASIC2.55□□□□□ -2
CCL3L1P16619 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCL3L1P16619 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.55□□□□□ -2
CCL3L1P16619 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.55□□□□□ -2
CCL3L1P16619 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.55□□□□□ -2
CCL3L1P16619 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.55□□□□□ -2
CCL3L1P16619 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.55□□□□□ -2
CCL3L1P16619 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.55□□□□□ -2
CCL3L1P16619 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.55□□□□□ -2
CCL3L1P16619 AC007424.1-203ENST00000554613 687 ntBASIC2.55□□□□□ -2
CCL3L1P16619 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.55□□□□□ -2
CCL3L1P16619 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.55□□□□□ -2
CCL3L1P16619 MIR5195-201ENST00000583555 115 ntBASIC2.55□□□□□ -2
CCL3L1P16619 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.55□□□□□ -2
CCL3L1P16619 AC005242.1-201ENST00000585658 438 ntBASIC2.55□□□□□ -2
CCL3L1P16619 AC012493.2-201ENST00000595083 291 ntBASIC2.55□□□□□ -2
CCL3L1P16619 YPEL5P2-201ENST00000605553 359 ntBASIC2.55□□□□□ -2
CCL3L1P16619 AC084036.1-201ENST00000609190 508 ntBASIC2.55□□□□□ -2
CCL3L1P16619 AL442067.2-201ENST00000614033 363 ntBASIC2.55□□□□□ -2
CCL3L1P16619 AC000123.2-201ENST00000623124 461 ntBASIC2.55□□□□□ -2
CCL3L1P16619 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.55□□□□□ -2
CCL3L1P16619 MIR7153-201ENST00000637758 57 ntBASIC2.55□□□□□ -2
CCL3L1P16619 AC073346.2-201ENST00000624724 2058 ntBASIC2.54□□□□□ -2
CCL3L1P16619 PHKBP1-201ENST00000450951 1951 ntBASIC2.54□□□□□ -2
CCL3L1P16619 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC2.54□□□□□ -2
CCL3L1P16619 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CCL3L1P16619 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCL3L1P16619 RNA5SP239-201ENST00000410218 129 ntBASIC2.54□□□□□ -2
CCL3L1P16619 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.54□□□□□ -2
CCL3L1P16619 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.54□□□□□ -2
CCL3L1P16619 KRR1P1-201ENST00000419430 803 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms