Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AP003122.5-201ENST00000527668 3766 ntBASIC3.55□□□□□ -1.84
COL11A1P12107 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL11A1P12107 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL11A1P12107 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL11A1P12107 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL11A1P12107 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL11A1P12107 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL11A1P12107 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
COL11A1P12107 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
COL11A1P12107 SNORA80A-201ENST00000363922 136 ntBASIC3.54□□□□□ -1.84
COL11A1P12107 GLRXP1-201ENST00000423261 334 ntBASIC3.54□□□□□ -1.84
COL11A1P12107 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.54□□□□□ -1.84
COL11A1P12107 RPS3AP43-201ENST00000479743 781 ntBASIC3.54□□□□□ -1.84
COL11A1P12107 AC021205.2-201ENST00000480069 347 ntBASIC3.54□□□□□ -1.84
COL11A1P12107 GOLGA5P1-201ENST00000507317 980 ntBASIC3.54□□□□□ -1.84
COL11A1P12107 AC022080.3-201ENST00000544433 482 ntBASIC3.54□□□□□ -1.84
COL11A1P12107 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.54□□□□□ -1.84
COL11A1P12107 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.54□□□□□ -1.84
COL11A1P12107 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.54□□□□□ -1.84
COL11A1P12107 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL11A1P12107 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.54□□□□□ -1.84
COL11A1P12107 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.54□□□□□ -1.84
COL11A1P12107 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL11A1P12107 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.54□□□□□ -1.84
COL11A1P12107 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.54□□□□□ -1.84
COL11A1P12107 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.54□□□□□ -1.84
COL11A1P12107 SNORA5B-201ENST00000363786 132 ntBASIC3.54□□□□□ -1.84
COL11A1P12107 AC104297.1-201ENST00000393779 870 ntBASIC3.54□□□□□ -1.84
COL11A1P12107 AC007899.1-201ENST00000412776 775 ntBASIC3.54□□□□□ -1.84
COL11A1P12107 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.54□□□□□ -1.84
COL11A1P12107 SUMO2P4-201ENST00000504193 276 ntBASIC3.54□□□□□ -1.84
COL11A1P12107 AC009812.2-201ENST00000517657 457 ntBASIC3.54□□□□□ -1.84
COL11A1P12107 AC090281.1-201ENST00000523019 276 ntBASIC3.54□□□□□ -1.84
COL11A1P12107 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.54□□□□□ -1.84
COL11A1P12107 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.54□□□□□ -1.84
COL11A1P12107 MIR622-201ENST00000638396 96 ntBASIC3.54□□□□□ -1.84
COL11A1P12107 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL11A1P12107 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL11A1P12107 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL11A1P12107 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.53□□□□□ -1.84
COL11A1P12107 OR5BR1P-201ENST00000524992 1330 ntBASIC3.53□□□□□ -1.84
COL11A1P12107 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
COL11A1P12107 AL031679.1-201ENST00000400616 525 ntBASIC3.53□□□□□ -1.84
COL11A1P12107 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL11A1P12107 FAR1P1-201ENST00000427163 934 ntBASIC3.53□□□□□ -1.84
COL11A1P12107 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.53□□□□□ -1.84
COL11A1P12107 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.53□□□□□ -1.84
COL11A1P12107 MTCO3P20-201ENST00000454926 688 ntBASIC3.53□□□□□ -1.84
COL11A1P12107 AC117440.1-201ENST00000474107 571 ntBASIC3.53□□□□□ -1.84
COL11A1P12107 RNU6-1334P-201ENST00000516032 105 ntBASIC3.53□□□□□ -1.84
COL11A1P12107 SNORA70.19-201ENST00000516717 90 ntBASIC3.53□□□□□ -1.84
COL11A1P12107 AP001207.2-201ENST00000519490 539 ntBASIC3.53□□□□□ -1.84
COL11A1P12107 AC010306.1-201ENST00000523223 1117 ntBASIC3.53□□□□□ -1.84
COL11A1P12107 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.53□□□□□ -1.84
COL11A1P12107 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.53□□□□□ -1.84
COL11A1P12107 VN1R90P-201ENST00000595717 726 ntBASIC3.53□□□□□ -1.84
COL11A1P12107 PRELID3BP8-201ENST00000604148 295 ntBASIC3.53□□□□□ -1.84
COL11A1P12107 AC013412.1-201ENST00000610687 192 ntBASIC3.53□□□□□ -1.84
COL11A1P12107 CYCSP41-201ENST00000616920 296 ntBASIC3.53□□□□□ -1.84
COL11A1P12107 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
COL11A1P12107 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.53□□□□□ -1.84
COL11A1P12107 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.53□□□□□ -1.84
COL11A1P12107 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.53□□□□□ -1.84
COL11A1P12107 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL11A1P12107 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL11A1P12107 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL11A1P12107 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
COL11A1P12107 AC090971.4-201ENST00000560291 1800 ntBASIC3.52□□□□□ -1.85
COL11A1P12107 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL11A1P12107 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
COL11A1P12107 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL11A1P12107 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
COL11A1P12107 PTP4A1P3-201ENST00000433661 420 ntBASIC3.52□□□□□ -1.85
COL11A1P12107 RPS26P40-201ENST00000435209 294 ntBASIC3.52□□□□□ -1.85
COL11A1P12107 AC005002.1-201ENST00000447458 540 ntBASIC3.52□□□□□ -1.85
COL11A1P12107 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.52□□□□□ -1.85
COL11A1P12107 OR5H3P-201ENST00000502817 919 ntBASIC3.52□□□□□ -1.85
COL11A1P12107 AC112184.1-201ENST00000505179 312 ntBASIC3.52□□□□□ -1.85
COL11A1P12107 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL11A1P12107 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COL11A1P12107 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.52□□□□□ -1.85
COL11A1P12107 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COL11A1P12107 RNU6-84P-201ENST00000607737 102 ntBASIC3.52□□□□□ -1.85
COL11A1P12107 AL451049.1-201ENST00000608672 497 ntBASIC3.52□□□□□ -1.85
COL11A1P12107 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL11A1P12107 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL11A1P12107 RNU6-301P-201ENST00000384277 107 ntBASIC3.51□□□□□ -1.85
COL11A1P12107 RANP4-201ENST00000413361 655 ntBASIC3.51□□□□□ -1.85
COL11A1P12107 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.51□□□□□ -1.85
COL11A1P12107 RFPL4AP5-201ENST00000514977 504 ntBASIC3.51□□□□□ -1.85
COL11A1P12107 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.51□□□□□ -1.85
COL11A1P12107 AC087276.1-201ENST00000529659 480 ntBASIC3.51□□□□□ -1.85
COL11A1P12107 MIR4425-201ENST00000580572 84 ntBASIC3.51□□□□□ -1.85
COL11A1P12107 AC015911.5-201ENST00000587076 451 ntBASIC3.51□□□□□ -1.85
COL11A1P12107 LINC00901.1-201ENST00000617252 152 ntBASIC3.51□□□□□ -1.85
COL11A1P12107 AL713922.2-201ENST00000619384 716 ntBASIC3.51□□□□□ -1.85
COL11A1P12107 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.51□□□□□ -1.85
COL11A1P12107 AC019080.5-201ENST00000624891 757 ntBASIC3.51□□□□□ -1.85
COL11A1P12107 SRP72P2-201ENST00000344851 1979 ntBASIC3.51□□□□□ -1.85
COL11A1P12107 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms