Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCNAP12004 AP000526.1-201ENST00000603308 1388 ntBASIC4.35□□□□□ -1.71
PCNAP12004 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCNAP12004 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCNAP12004 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCNAP12004 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.34□□□□□ -1.71
PCNAP12004 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
PCNAP12004 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PCNAP12004 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCNAP12004 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.34□□□□□ -1.71
PCNAP12004 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCNAP12004 AC007685.1-201ENST00000329806 452 ntBASIC4.34□□□□□ -1.71
PCNAP12004 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCNAP12004 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCNAP12004 RNU6-657P-201ENST00000383904 107 ntBASIC4.34□□□□□ -1.71
PCNAP12004 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PCNAP12004 AC136624.1-201ENST00000400791 413 ntBASIC4.34□□□□□ -1.71
PCNAP12004 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.34□□□□□ -1.71
PCNAP12004 AL139128.1-201ENST00000413921 941 ntBASIC4.34□□□□□ -1.71
PCNAP12004 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.34□□□□□ -1.71
PCNAP12004 RBMY2KP-201ENST00000418221 992 ntBASIC4.34□□□□□ -1.71
PCNAP12004 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.34□□□□□ -1.71
PCNAP12004 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.34□□□□□ -1.71
PCNAP12004 AC233981.1-201ENST00000423224 461 ntBASIC4.34□□□□□ -1.71
PCNAP12004 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.34□□□□□ -1.71
PCNAP12004 BRWD1P3-201ENST00000428816 390 ntBASIC4.34□□□□□ -1.71
PCNAP12004 AC005345.1-201ENST00000431868 217 ntBASIC4.34□□□□□ -1.71
PCNAP12004 AL050321.1-201ENST00000432363 400 ntBASIC4.34□□□□□ -1.71
PCNAP12004 AL049745.1-201ENST00000433953 286 ntBASIC4.34□□□□□ -1.71
PCNAP12004 UBE2D3P1-201ENST00000436669 444 ntBASIC4.34□□□□□ -1.71
PCNAP12004 AC105402.2-201ENST00000438503 358 ntBASIC4.34□□□□□ -1.71
PCNAP12004 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PCNAP12004 AC012671.1-201ENST00000451912 203 ntBASIC4.34□□□□□ -1.71
PCNAP12004 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.34□□□□□ -1.71
PCNAP12004 AC010326.1-201ENST00000462726 602 ntBASIC4.34□□□□□ -1.71
PCNAP12004 IGLV2-34-201ENST00000490007 283 ntBASIC4.34□□□□□ -1.71
PCNAP12004 AC092045.1-201ENST00000495716 1231 ntBASIC4.34□□□□□ -1.71
PCNAP12004 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.34□□□□□ -1.71
PCNAP12004 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCNAP12004 AC109445.1-201ENST00000512356 383 ntBASIC4.34□□□□□ -1.71
PCNAP12004 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.34□□□□□ -1.71
PCNAP12004 RNY4P37-201ENST00000516225 96 ntBASIC4.34□□□□□ -1.71
PCNAP12004 SOD1P3-201ENST00000518682 454 ntBASIC4.34□□□□□ -1.71
PCNAP12004 AP001781.1-201ENST00000530977 207 ntBASIC4.34□□□□□ -1.71
PCNAP12004 AC100770.1-201ENST00000532310 322 ntBASIC4.34□□□□□ -1.71
PCNAP12004 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.34□□□□□ -1.71
PCNAP12004 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.34□□□□□ -1.71
PCNAP12004 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.34□□□□□ -1.71
PCNAP12004 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.34□□□□□ -1.71
PCNAP12004 AGGF1P6-201ENST00000569213 976 ntBASIC4.34□□□□□ -1.71
PCNAP12004 AC005412.1-201ENST00000580812 1049 ntBASIC4.34□□□□□ -1.71
PCNAP12004 AC008088.1-201ENST00000580993 280 ntBASIC4.34□□□□□ -1.71
PCNAP12004 AC022069.1-201ENST00000582910 658 ntBASIC4.34□□□□□ -1.71
PCNAP12004 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.34□□□□□ -1.71
PCNAP12004 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.34□□□□□ -1.71
PCNAP12004 AC018638.7-201ENST00000605836 1114 ntBASIC4.34□□□□□ -1.71
PCNAP12004 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.34□□□□□ -1.71
PCNAP12004 AC090246.1-201ENST00000616499 426 ntBASIC4.34□□□□□ -1.71
PCNAP12004 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCNAP12004 MIR7154-201ENST00000620673 73 ntBASIC4.34□□□□□ -1.71
PCNAP12004 AL512506.2-201ENST00000624472 458 ntBASIC4.34□□□□□ -1.71
PCNAP12004 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PCNAP12004 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PCNAP12004 ZNF542P-204ENST00000482727 1305 ntBASIC4.34□□□□□ -1.71
PCNAP12004 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCNAP12004 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCNAP12004 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCNAP12004 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.34□□□□□ -1.72
PCNAP12004 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.34□□□□□ -1.72
PCNAP12004 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCNAP12004 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
PCNAP12004 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PCNAP12004 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
PCNAP12004 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
PCNAP12004 AC012321.1-201ENST00000561622 1588 ntBASIC4.33□□□□□ -1.72
PCNAP12004 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCNAP12004 AC107982.1-201ENST00000507171 1300 ntBASIC4.33□□□□□ -1.72
PCNAP12004 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCNAP12004 RNA5SP151-201ENST00000365632 117 ntBASIC4.33□□□□□ -1.72
PCNAP12004 AL049697.2-201ENST00000403708 294 ntBASIC4.33□□□□□ -1.72
PCNAP12004 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.33□□□□□ -1.72
PCNAP12004 AC008280.1-201ENST00000418851 412 ntBASIC4.33□□□□□ -1.72
PCNAP12004 USP9YP26-201ENST00000421008 661 ntBASIC4.33□□□□□ -1.72
PCNAP12004 RAD23BP1-201ENST00000421404 1227 ntBASIC4.33□□□□□ -1.72
PCNAP12004 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.33□□□□□ -1.72
PCNAP12004 AL593851.1-201ENST00000426171 157 ntBASIC4.33□□□□□ -1.72
PCNAP12004 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.33□□□□□ -1.72
PCNAP12004 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.33□□□□□ -1.72
PCNAP12004 AL353748.1-201ENST00000440753 474 ntBASIC4.33□□□□□ -1.72
PCNAP12004 MTND5P2-201ENST00000442927 1142 ntBASIC4.33□□□□□ -1.72
PCNAP12004 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.33□□□□□ -1.72
PCNAP12004 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.33□□□□□ -1.72
PCNAP12004 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.33□□□□□ -1.72
PCNAP12004 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.33□□□□□ -1.72
PCNAP12004 SNRPGP5-201ENST00000456003 220 ntBASIC4.33□□□□□ -1.72
PCNAP12004 RPS27AP17-201ENST00000463344 455 ntBASIC4.33□□□□□ -1.72
PCNAP12004 RPL23AP65-201ENST00000475608 468 ntBASIC4.33□□□□□ -1.72
PCNAP12004 AP000926.1-201ENST00000479573 241 ntBASIC4.33□□□□□ -1.72
PCNAP12004 OR4G11P-201ENST00000492842 939 ntBASIC4.33□□□□□ -1.72
PCNAP12004 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms