Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC244258.1-201ENST00000637553 1071 ntBASIC4.2□□□□□ -1.74
TOP1P11387 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TOP1P11387 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TOP1P11387 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TOP1P11387 AL365440.1-201ENST00000436135 2167 ntBASIC4.2□□□□□ -1.74
TOP1P11387 GTF2H2B-203ENST00000508065 1432 ntBASIC4.2□□□□□ -1.74
TOP1P11387 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TOP1P11387 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.19□□□□□ -1.74
TOP1P11387 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TOP1P11387 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
TOP1P11387 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
TOP1P11387 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TOP1P11387 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.19□□□□□ -1.74
TOP1P11387 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.19□□□□□ -1.74
TOP1P11387 SNORA70E-201ENST00000384492 135 ntBASIC4.19□□□□□ -1.74
TOP1P11387 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TOP1P11387 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.19□□□□□ -1.74
TOP1P11387 RNU2-65P-201ENST00000410162 185 ntBASIC4.19□□□□□ -1.74
TOP1P11387 AC093578.1-201ENST00000415219 368 ntBASIC4.19□□□□□ -1.74
TOP1P11387 AC002075.2-201ENST00000425207 252 ntBASIC4.19□□□□□ -1.74
TOP1P11387 YME1L1P1-201ENST00000429435 297 ntBASIC4.19□□□□□ -1.74
TOP1P11387 MOB1AP1-201ENST00000430903 535 ntBASIC4.19□□□□□ -1.74
TOP1P11387 AC073063.1-201ENST00000434352 607 ntBASIC4.19□□□□□ -1.74
TOP1P11387 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.19□□□□□ -1.74
TOP1P11387 AC092641.1-201ENST00000440229 772 ntBASIC4.19□□□□□ -1.74
TOP1P11387 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.19□□□□□ -1.74
TOP1P11387 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.19□□□□□ -1.74
TOP1P11387 HMGN2P7-201ENST00000456186 273 ntBASIC4.19□□□□□ -1.74
TOP1P11387 RPL37P6-202ENST00000464216 403 ntBASIC4.19□□□□□ -1.74
TOP1P11387 AC146507.1-201ENST00000468335 354 ntBASIC4.19□□□□□ -1.74
TOP1P11387 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.19□□□□□ -1.74
TOP1P11387 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.19□□□□□ -1.74
TOP1P11387 NDUFB4P9-201ENST00000511646 388 ntBASIC4.19□□□□□ -1.74
TOP1P11387 RNU6-579P-201ENST00000516879 102 ntBASIC4.19□□□□□ -1.74
TOP1P11387 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.19□□□□□ -1.74
TOP1P11387 SOD1P3-201ENST00000518682 454 ntBASIC4.19□□□□□ -1.74
TOP1P11387 AC103843.2-201ENST00000530523 682 ntBASIC4.19□□□□□ -1.74
TOP1P11387 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.19□□□□□ -1.74
TOP1P11387 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.19□□□□□ -1.74
TOP1P11387 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.19□□□□□ -1.74
TOP1P11387 KLKP1-201ENST00000595979 403 ntBASIC4.19□□□□□ -1.74
TOP1P11387 Z82195.1-201ENST00000604558 398 ntBASIC4.19□□□□□ -1.74
TOP1P11387 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.19□□□□□ -1.74
TOP1P11387 U6.48-201ENST00000618523 106 ntBASIC4.19□□□□□ -1.74
TOP1P11387 AL357559.1-201ENST00000622228 274 ntBASIC4.19□□□□□ -1.74
TOP1P11387 AC006065.5-201ENST00000623427 349 ntBASIC4.19□□□□□ -1.74
TOP1P11387 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.19□□□□□ -1.74
TOP1P11387 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.19□□□□□ -1.74
TOP1P11387 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TOP1P11387 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TOP1P11387 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
TOP1P11387 EXOC5P1-201ENST00000510543 1969 ntBASIC4.18□□□□□ -1.74
TOP1P11387 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TOP1P11387 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TOP1P11387 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.18□□□□□ -1.74
TOP1P11387 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.18□□□□□ -1.74
TOP1P11387 RNU6-152P-201ENST00000384037 107 ntBASIC4.18□□□□□ -1.74
TOP1P11387 MIR7-3-201ENST00000384898 110 ntBASIC4.18□□□□□ -1.74
TOP1P11387 LINC01881-201ENST00000416103 412 ntBASIC4.18□□□□□ -1.74
TOP1P11387 DBIP2-201ENST00000419076 262 ntBASIC4.18□□□□□ -1.74
TOP1P11387 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.18□□□□□ -1.74
TOP1P11387 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.18□□□□□ -1.74
TOP1P11387 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TOP1P11387 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.18□□□□□ -1.74
TOP1P11387 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.18□□□□□ -1.74
TOP1P11387 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.18□□□□□ -1.74
TOP1P11387 AC096992.1-201ENST00000459808 709 ntBASIC4.18□□□□□ -1.74
TOP1P11387 AC034236.1-201ENST00000469891 373 ntBASIC4.18□□□□□ -1.74
TOP1P11387 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.18□□□□□ -1.74
TOP1P11387 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.18□□□□□ -1.74
TOP1P11387 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.18□□□□□ -1.74
TOP1P11387 MTCO1P30-201ENST00000515244 580 ntBASIC4.18□□□□□ -1.74
TOP1P11387 DUXAP2-201ENST00000519198 589 ntBASIC4.18□□□□□ -1.74
TOP1P11387 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.18□□□□□ -1.74
TOP1P11387 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TOP1P11387 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.18□□□□□ -1.74
TOP1P11387 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.18□□□□□ -1.74
TOP1P11387 AC022387.2-201ENST00000604050 448 ntBASIC4.18□□□□□ -1.74
TOP1P11387 AC112503.1-201ENST00000608436 391 ntBASIC4.18□□□□□ -1.74
TOP1P11387 MIR7851-201ENST00000610611 160 ntBASIC4.18□□□□□ -1.74
TOP1P11387 AL392088.2-201ENST00000637607 285 ntBASIC4.18□□□□□ -1.74
TOP1P11387 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TOP1P11387 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
TOP1P11387 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TOP1P11387 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
TOP1P11387 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TOP1P11387 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TOP1P11387 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
TOP1P11387 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TOP1P11387 AC007656.2-201ENST00000624902 4547 ntBASIC4.17□□□□□ -1.74
TOP1P11387 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
TOP1P11387 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
TOP1P11387 RNU6-356P-201ENST00000384140 107 ntBASIC4.17□□□□□ -1.74
TOP1P11387 AC245052.5-201ENST00000416320 649 ntBASIC4.17□□□□□ -1.74
TOP1P11387 AC127526.1-201ENST00000417526 366 ntBASIC4.17□□□□□ -1.74
TOP1P11387 AL451062.2-201ENST00000427515 271 ntBASIC4.17□□□□□ -1.74
TOP1P11387 UBE2V2P3-201ENST00000433562 437 ntBASIC4.17□□□□□ -1.74
TOP1P11387 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.17□□□□□ -1.74
TOP1P11387 RPS29P31-201ENST00000446147 164 ntBASIC4.17□□□□□ -1.74
TOP1P11387 HMGN2P21-201ENST00000447764 270 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms