Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.9□□□□□ -1.95
CD28P10747 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CD28P10747 MTATP6P22-201ENST00000507369 598 ntBASIC2.9□□□□□ -1.95
CD28P10747 AC008494.2-201ENST00000514544 370 ntBASIC2.9□□□□□ -1.95
CD28P10747 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC2.9□□□□□ -1.95
CD28P10747 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.9□□□□□ -1.95
CD28P10747 OR5B10P-201ENST00000532869 642 ntBASIC2.9□□□□□ -1.95
CD28P10747 AC025260.1-201ENST00000548858 430 ntBASIC2.9□□□□□ -1.95
CD28P10747 AC093014.1-201ENST00000548926 724 ntBASIC2.9□□□□□ -1.95
CD28P10747 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC2.9□□□□□ -1.95
CD28P10747 AC006960.3-201ENST00000561845 705 ntBASIC2.9□□□□□ -1.95
CD28P10747 AP001180.3-201ENST00000582221 145 ntBASIC2.9□□□□□ -1.95
CD28P10747 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.9□□□□□ -1.95
CD28P10747 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.9□□□□□ -1.95
CD28P10747 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.9□□□□□ -1.95
CD28P10747 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
CD28P10747 RNU1-30P-201ENST00000606575 163 ntBASIC2.9□□□□□ -1.95
CD28P10747 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC2.9□□□□□ -1.95
CD28P10747 AL118508.4-201ENST00000624142 1176 ntBASIC2.9□□□□□ -1.95
CD28P10747 AC083865.1-201ENST00000636634 831 ntBASIC2.9□□□□□ -1.95
CD28P10747 U6.105-201ENST00000637379 88 ntBASIC2.9□□□□□ -1.95
CD28P10747 MAPK10-372ENST00000641954 3413 ntBASIC2.9□□□□□ -1.95
CD28P10747 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.9□□□□□ -1.95
CD28P10747 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
CD28P10747 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.9□□□□□ -1.95
CD28P10747 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CD28P10747 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CD28P10747 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CD28P10747 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CD28P10747 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CD28P10747 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.89□□□□□ -1.95
CD28P10747 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CD28P10747 RNA5SP72-201ENST00000364442 117 ntBASIC2.89□□□□□ -1.95
CD28P10747 AL138878.1-201ENST00000405131 347 ntBASIC2.89□□□□□ -1.95
CD28P10747 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CD28P10747 ATP5A1P2-201ENST00000412323 255 ntBASIC2.89□□□□□ -1.95
CD28P10747 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC2.89□□□□□ -1.95
CD28P10747 AC234782.4-201ENST00000417646 1048 ntBASIC2.89□□□□□ -1.95
CD28P10747 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC2.89□□□□□ -1.95
CD28P10747 AC093698.1-201ENST00000423843 571 ntBASIC2.89□□□□□ -1.95
CD28P10747 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC2.89□□□□□ -1.95
CD28P10747 RPL7P4-203ENST00000430239 730 ntBASIC2.89□□□□□ -1.95
CD28P10747 AC011742.1-201ENST00000431448 434 ntBASIC2.89□□□□□ -1.95
CD28P10747 MTND4LP7-201ENST00000431728 294 ntBASIC2.89□□□□□ -1.95
CD28P10747 AC073063.1-201ENST00000434352 607 ntBASIC2.89□□□□□ -1.95
CD28P10747 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC2.89□□□□□ -1.95
CD28P10747 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.89□□□□□ -1.95
CD28P10747 MTCO3P43-201ENST00000440974 771 ntBASIC2.89□□□□□ -1.95
CD28P10747 TPTE2P6-202ENST00000445572 1007 ntBASIC2.89□□□□□ -1.95
CD28P10747 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.89□□□□□ -1.95
CD28P10747 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC2.89□□□□□ -1.95
CD28P10747 PPIAP3-201ENST00000450588 505 ntBASIC2.89□□□□□ -1.95
CD28P10747 SNRPGP5-201ENST00000456003 220 ntBASIC2.89□□□□□ -1.95
CD28P10747 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CD28P10747 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.89□□□□□ -1.95
CD28P10747 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CD28P10747 AL035404.1-201ENST00000497982 568 ntBASIC2.89□□□□□ -1.95
CD28P10747 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.89□□□□□ -1.95
CD28P10747 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.89□□□□□ -1.95
CD28P10747 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.89□□□□□ -1.95
CD28P10747 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.89□□□□□ -1.95
CD28P10747 AC074250.1-201ENST00000511117 192 ntBASIC2.89□□□□□ -1.95
CD28P10747 MIR2114-201ENST00000516645 80 ntBASIC2.89□□□□□ -1.95
CD28P10747 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.89□□□□□ -1.95
CD28P10747 COX6B1P6-201ENST00000522347 255 ntBASIC2.89□□□□□ -1.95
CD28P10747 OR5AK3P-201ENST00000527486 1297 ntBASIC2.89□□□□□ -1.95
CD28P10747 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.89□□□□□ -1.95
CD28P10747 AC138393.1-206ENST00000540997 1886 ntBASIC2.89□□□□□ -1.95
CD28P10747 AC025918.2-201ENST00000558683 763 ntBASIC2.89□□□□□ -1.95
CD28P10747 AC009101.1-201ENST00000568135 242 ntBASIC2.89□□□□□ -1.95
CD28P10747 MIR4458-201ENST00000578872 75 ntBASIC2.89□□□□□ -1.95
CD28P10747 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
CD28P10747 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC2.89□□□□□ -1.95
CD28P10747 ELOCP35-201ENST00000604289 336 ntBASIC2.89□□□□□ -1.95
CD28P10747 AL392112.1-201ENST00000605115 829 ntBASIC2.89□□□□□ -1.95
CD28P10747 HMGB1P50-201ENST00000605814 607 ntBASIC2.89□□□□□ -1.95
CD28P10747 AC096577.2-201ENST00000611455 153 ntBASIC2.89□□□□□ -1.95
CD28P10747 FRG1DP-201ENST00000635586 771 ntBASIC2.89□□□□□ -1.95
CD28P10747 ATE1-AS1-202ENST00000636460 506 ntBASIC2.89□□□□□ -1.95
CD28P10747 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CD28P10747 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CD28P10747 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CD28P10747 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CD28P10747 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CD28P10747 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CD28P10747 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CD28P10747 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CD28P10747 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC2.89□□□□□ -1.95
CD28P10747 NCAPGP1-201ENST00000505112 1814 ntBASIC2.89□□□□□ -1.95
CD28P10747 MTND5P11-201ENST00000511037 1812 ntBASIC2.89□□□□□ -1.95
CD28P10747 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
CD28P10747 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CD28P10747 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CD28P10747 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CD28P10747 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CD28P10747 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.88□□□□□ -1.95
CD28P10747 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.88□□□□□ -1.95
CD28P10747 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CD28P10747 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.88□□□□□ -1.95
CD28P10747 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms