Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 INTS6P1-201ENST00000504674 2530 ntBASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 SNORD81.2-201ENST00000365153 76 ntBASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 AL078604.1-201ENST00000404609 466 ntBASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 AL356432.1-201ENST00000405809 419 ntBASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 ATP6V1G1P7-201ENST00000415853 349 ntBASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 HMGB3P20-201ENST00000417997 600 ntBASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 GPM6BP2-201ENST00000432046 144 ntBASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 GPM6BP1-201ENST00000446387 144 ntBASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 AC104634.1-201ENST00000452720 462 ntBASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 RN7SL738P-201ENST00000470264 297 ntBASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 AC010301.1-201ENST00000473936 355 ntBASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 AC017015.1-201ENST00000477387 286 ntBASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 Y_RNA.693-201ENST00000516641 110 ntBASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 snoU109.6-201ENST00000516831 118 ntBASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 MIR5697-201ENST00000578045 78 ntBASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 AC023813.4-201ENST00000607580 580 ntBASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 AC093799.2-201ENST00000610062 578 ntBASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 Z95327.3-201ENST00000610385 572 ntBASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 AC092079.1-201ENST00000558620 1985 ntBASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CSB-PGBD3P0DP91 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 RNU6-984P-201ENST00000363236 109 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 RNU6-254P-201ENST00000363377 107 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 IARS-201ENST00000375627 697 ntTSL 3 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 RNU6-878P-201ENST00000384578 110 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 MIR600-201ENST00000385007 98 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 SNORA75.4-201ENST00000391278 119 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 RSU1P3-201ENST00000412878 835 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 JKAMPP1-201ENST00000413804 919 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 MTND3P17-201ENST00000416968 344 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 SNRPEP7-201ENST00000438350 220 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 RPS29P33-201ENST00000456717 146 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AC092324.1-201ENST00000468671 324 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AC092754.1-201ENST00000472975 479 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AC114981.1-201ENST00000503897 678 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 POU5F1P7-201ENST00000508759 541 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 IGHVII-44-2-201ENST00000517728 250 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 OR5M2P-201ENST00000529003 936 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 PSMA6P4-201ENST00000603247 718 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AL133338.2-201ENST00000604292 736 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AC009597.2-201ENST00000604659 592 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AC097468.3-201ENST00000607956 456 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AC093788.1-201ENST00000609356 927 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AL731566.2-201ENST00000618971 317 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AC091905.4-201ENST00000623432 202 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 AC138915.3-201ENST00000562908 1389 ntBASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.26
CSB-PGBD3P0DP91 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
CSB-PGBD3P0DP91 AC073365.1-203ENST00000641055 1992 ntBASIC7.15□□□□□ -1.27
CSB-PGBD3P0DP91 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC7.15□□□□□ -1.27
CSB-PGBD3P0DP91 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
CSB-PGBD3P0DP91 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms