Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 U7.8-201ENST00000619968 63 ntBASIC3.76□□□□□ -1.81
HOXD4P09016 AC104985.3-201ENST00000623479 597 ntBASIC3.76□□□□□ -1.81
HOXD4P09016 AC019278.1-201ENST00000623516 479 ntBASIC3.76□□□□□ -1.81
HOXD4P09016 AP003072.4-201ENST00000624580 310 ntBASIC3.76□□□□□ -1.81
HOXD4P09016 AC097655.1-201ENST00000635075 318 ntBASIC3.76□□□□□ -1.81
HOXD4P09016 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXD4P09016 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HOXD4P09016 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXD4P09016 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXD4P09016 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXD4P09016 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXD4P09016 RNF6P1-201ENST00000444889 1784 ntBASIC3.76□□□□□ -1.81
HOXD4P09016 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXD4P09016 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXD4P09016 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXD4P09016 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXD4P09016 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD4P09016 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD4P09016 MTND4P31-201ENST00000425607 1343 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 MAPK10-372ENST00000641954 3413 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXD4P09016 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD4P09016 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXD4P09016 NOL8P1-201ENST00000508336 3529 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD4P09016 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.75□□□□□ -1.81
HOXD4P09016 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HOXD4P09016 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HOXD4P09016 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
HOXD4P09016 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXD4P09016 RPL21P65-201ENST00000406094 466 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 RNA5SP44-201ENST00000410446 133 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 MIR1911-201ENST00000410783 80 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 OR8G2P-201ENST00000412796 908 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 MTATP6P20-201ENST00000414147 562 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 AL592310.1-201ENST00000414330 671 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 AL449283.1-202ENST00000418249 604 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXD4P09016 ELOCP11-201ENST00000436690 332 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXD4P09016 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD4P09016 OR10R1P-201ENST00000441524 1141 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXD4P09016 ELOCP13-201ENST00000443934 329 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 ELOCP16-201ENST00000444494 332 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXD4P09016 AC092685.1-201ENST00000447960 1243 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD4P09016 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXD4P09016 RPL7P1-201ENST00000468161 747 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 RPL7P9-201ENST00000468715 747 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 AC111193.1-201ENST00000504097 155 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 AC010460.1-201ENST00000507087 466 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
HOXD4P09016 AC113420.1-201ENST00000507903 571 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 AC109458.1-201ENST00000508858 316 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.75□□□□□ -1.81
HOXD4P09016 RNA5SP143-201ENST00000516936 115 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.75□□□□□ -1.81
HOXD4P09016 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.75□□□□□ -1.81
HOXD4P09016 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXD4P09016 OR10V3P-201ENST00000525712 725 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 PHBP17-201ENST00000528576 541 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXD4P09016 OR8K4P-201ENST00000534608 872 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD4P09016 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXD4P09016 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.75□□□□□ -1.81
HOXD4P09016 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXD4P09016 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.75□□□□□ -1.81
HOXD4P09016 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXD4P09016 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXD4P09016 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXD4P09016 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXD4P09016 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.75□□□□□ -1.81
HOXD4P09016 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.75□□□□□ -1.81
HOXD4P09016 AC106052.1-201ENST00000608029 497 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 AC009974.1-201ENST00000608881 455 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD4P09016 AC007546.1-201ENST00000619452 559 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
HOXD4P09016 AC139713.2-210ENST00000641741 992 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 OR6C71P-202ENST00000641886 1107 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.75□□□□□ -1.81
HOXD4P09016 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD4P09016 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
HOXD4P09016 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD4P09016 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD4P09016 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HOXD4P09016 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.75□□□□□ -1.81
HOXD4P09016 RLIMP1-201ENST00000339626 1680 ntBASIC3.75□□□□□ -1.81
HOXD4P09016 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXD4P09016 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXD4P09016 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
HOXD4P09016 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.74□□□□□ -1.81
HOXD4P09016 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HOXD4P09016 METTL21EP-201ENST00000298105 713 ntBASIC3.74□□□□□ -1.81
HOXD4P09016 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HOXD4P09016 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
HOXD4P09016 SNORD65C-201ENST00000390962 71 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms