Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.46□□□□□ -1.86
SEMA3DO95025 CBX1P4-201ENST00000439415 457 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 AL645931.1-201ENST00000439737 410 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.46□□□□□ -1.86
SEMA3DO95025 HMGB1P5-202ENST00000451497 985 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 AC010468.1-201ENST00000461022 817 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.46□□□□□ -1.86
SEMA3DO95025 AC107398.1-201ENST00000486904 505 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.46□□□□□ -1.86
SEMA3DO95025 MTCO1P31-201ENST00000506355 492 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 PCBP2P3-201ENST00000509726 843 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SEMA3DO95025 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SEMA3DO95025 RNU6-1004P-201ENST00000516584 111 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 AC007991.1-201ENST00000522680 631 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 OR4A2P-201ENST00000527276 913 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 AC025260.1-201ENST00000548858 430 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 AC023161.2-201ENST00000551218 780 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.46□□□□□ -1.86
SEMA3DO95025 AC106785.3-201ENST00000564064 847 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.46□□□□□ -1.86
SEMA3DO95025 MTCO3P22-201ENST00000603219 784 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 AC024941.1-201ENST00000612250 334 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 PLCE1P1-201ENST00000622094 305 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 AC007342.8-201ENST00000623278 678 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 AC104820.1-201ENST00000624183 307 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
SEMA3DO95025 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SEMA3DO95025 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
SEMA3DO95025 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SEMA3DO95025 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SEMA3DO95025 AL161912.2-201ENST00000565707 3007 ntBASIC3.46□□□□□ -1.86
SEMA3DO95025 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.45□□□□□ -1.86
SEMA3DO95025 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SEMA3DO95025 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.45□□□□□ -1.86
SEMA3DO95025 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SEMA3DO95025 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SEMA3DO95025 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
SEMA3DO95025 RNU6-356P-201ENST00000384140 107 ntBASIC3.45□□□□□ -1.86
SEMA3DO95025 SNORA57.1-201ENST00000391227 145 ntBASIC3.45□□□□□ -1.86
SEMA3DO95025 AL589655.1-201ENST00000405398 482 ntBASIC3.45□□□□□ -1.86
SEMA3DO95025 AP000567.1-201ENST00000406413 156 ntBASIC3.45□□□□□ -1.86
SEMA3DO95025 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.45□□□□□ -1.86
SEMA3DO95025 MTND4P11-201ENST00000417020 1058 ntBASIC3.45□□□□□ -1.86
SEMA3DO95025 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.45□□□□□ -1.86
SEMA3DO95025 AC245054.1-201ENST00000420944 258 ntBASIC3.45□□□□□ -1.86
SEMA3DO95025 SDCBPP2-201ENST00000424643 885 ntBASIC3.45□□□□□ -1.86
SEMA3DO95025 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.45□□□□□ -1.86
SEMA3DO95025 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.45□□□□□ -1.86
SEMA3DO95025 MTND3P4-201ENST00000453537 303 ntBASIC3.45□□□□□ -1.86
SEMA3DO95025 PTGES3P5-201ENST00000455109 434 ntBASIC3.45□□□□□ -1.86
SEMA3DO95025 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.45□□□□□ -1.86
SEMA3DO95025 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.45□□□□□ -1.86
SEMA3DO95025 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.45□□□□□ -1.86
SEMA3DO95025 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.45□□□□□ -1.86
SEMA3DO95025 HMGB1P46-201ENST00000520062 610 ntBASIC3.45□□□□□ -1.86
SEMA3DO95025 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.45□□□□□ -1.86
SEMA3DO95025 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.45□□□□□ -1.86
SEMA3DO95025 AC005156.1-201ENST00000613371 573 ntBASIC3.45□□□□□ -1.86
SEMA3DO95025 AC011472.4-201ENST00000615848 491 ntBASIC3.45□□□□□ -1.86
SEMA3DO95025 AC069209.1-201ENST00000619282 651 ntBASIC3.45□□□□□ -1.86
SEMA3DO95025 AC022079.2-201ENST00000619739 566 ntBASIC3.45□□□□□ -1.86
SEMA3DO95025 AP003355.3-201ENST00000623465 114 ntBASIC3.45□□□□□ -1.86
SEMA3DO95025 AC015726.3-201ENST00000624501 418 ntBASIC3.45□□□□□ -1.86
SEMA3DO95025 MIR7153-201ENST00000637758 57 ntBASIC3.45□□□□□ -1.86
SEMA3DO95025 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
SEMA3DO95025 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SEMA3DO95025 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.45□□□□□ -1.86
SEMA3DO95025 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SEMA3DO95025 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SEMA3DO95025 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SEMA3DO95025 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SEMA3DO95025 DDX6P1-205ENST00000441966 1436 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 PWAR6-201ENST00000552334 4618 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.44□□□□□ -1.86
SEMA3DO95025 U8.11-201ENST00000384699 133 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 U8.12-201ENST00000384701 133 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 RPL7P60-201ENST00000397636 735 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 ATP5A1P2-201ENST00000412323 255 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 RANP4-201ENST00000413361 655 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 RPL31P2-201ENST00000413849 377 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 NIPA2P1-201ENST00000426223 976 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.44□□□□□ -1.86
SEMA3DO95025 SLC31A1P1-201ENST00000451221 567 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 U8.18-201ENST00000459285 133 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 AC023598.1-201ENST00000472521 361 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 AC007688.1-201ENST00000475592 759 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 AC091959.2-201ENST00000477363 321 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.44□□□□□ -1.86
SEMA3DO95025 MTATP6P22-201ENST00000507369 598 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SEMA3DO95025 ARL2BPP6-201ENST00000512757 439 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.44□□□□□ -1.86
SEMA3DO95025 OR5AP1P-201ENST00000529730 940 ntBASIC3.44□□□□□ -1.86
SEMA3DO95025 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.44□□□□□ -1.86
SEMA3DO95025 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.44□□□□□ -1.86
SEMA3DO95025 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.44□□□□□ -1.86
SEMA3DO95025 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.44□□□□□ -1.86
SEMA3DO95025 MIR548Y-201ENST00000582739 110 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms