Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 ATP5F1P7-201ENST00000567330 760 ntBASIC3.85□□□□□ -1.79
SDC3O75056 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.85□□□□□ -1.79
SDC3O75056 AC020914.4-201ENST00000597690 277 ntBASIC3.85□□□□□ -1.79
SDC3O75056 AC026741.1-201ENST00000605892 482 ntBASIC3.85□□□□□ -1.79
SDC3O75056 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.85□□□□□ -1.79
SDC3O75056 AC096586.1-201ENST00000610267 561 ntBASIC3.85□□□□□ -1.79
SDC3O75056 AL359535.1-201ENST00000612100 1087 ntBASIC3.85□□□□□ -1.79
SDC3O75056 AC020978.9-201ENST00000624380 1141 ntBASIC3.85□□□□□ -1.79
SDC3O75056 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.85□□□□□ -1.79
SDC3O75056 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.85□□□□□ -1.79
SDC3O75056 DCAF13P1-201ENST00000495256 1330 ntBASIC3.85□□□□□ -1.79
SDC3O75056 AC083899.2-201ENST00000423285 1376 ntBASIC3.85□□□□□ -1.79
SDC3O75056 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.85□□□□□ -1.79
SDC3O75056 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SDC3O75056 AC027287.1-201ENST00000553115 1453 ntBASIC3.85□□□□□ -1.79
SDC3O75056 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SDC3O75056 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.85□□□□□ -1.79
SDC3O75056 AC046144.1-201ENST00000478559 1853 ntBASIC3.84□□□□□ -1.79
SDC3O75056 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.84□□□□□ -1.79
SDC3O75056 SNORA70E-201ENST00000384492 135 ntBASIC3.84□□□□□ -1.79
SDC3O75056 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SDC3O75056 AP002784.2-201ENST00000397300 549 ntBASIC3.84□□□□□ -1.79
SDC3O75056 SNORA3.3-201ENST00000408712 125 ntBASIC3.84□□□□□ -1.79
SDC3O75056 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.84□□□□□ -1.79
SDC3O75056 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.84□□□□□ -1.79
SDC3O75056 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.84□□□□□ -1.79
SDC3O75056 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.84□□□□□ -1.79
SDC3O75056 AC092647.1-201ENST00000420654 287 ntBASIC3.84□□□□□ -1.79
SDC3O75056 AC092832.1-201ENST00000422934 400 ntBASIC3.84□□□□□ -1.79
SDC3O75056 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.84□□□□□ -1.79
SDC3O75056 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.84□□□□□ -1.79
SDC3O75056 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SDC3O75056 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.84□□□□□ -1.79
SDC3O75056 FABP5P3-201ENST00000437960 408 ntBASIC3.84□□□□□ -1.79
SDC3O75056 AC004865.1-201ENST00000442276 1003 ntBASIC3.84□□□□□ -1.79
SDC3O75056 AL096829.2-201ENST00000446582 742 ntBASIC3.84□□□□□ -1.79
SDC3O75056 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SDC3O75056 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.84□□□□□ -1.79
SDC3O75056 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SDC3O75056 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.84□□□□□ -1.79
SDC3O75056 NANOGP10-201ENST00000453325 895 ntBASIC3.84□□□□□ -1.79
SDC3O75056 AC015908.1-201ENST00000478739 476 ntBASIC3.84□□□□□ -1.79
SDC3O75056 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.84□□□□□ -1.79
SDC3O75056 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.84□□□□□ -1.79
SDC3O75056 AC026403.1-201ENST00000518938 295 ntBASIC3.84□□□□□ -1.79
SDC3O75056 MTND1P6-201ENST00000523621 946 ntBASIC3.84□□□□□ -1.79
SDC3O75056 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.84□□□□□ -1.79
SDC3O75056 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.84□□□□□ -1.79
SDC3O75056 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.84□□□□□ -1.79
SDC3O75056 AC124068.1-201ENST00000563131 678 ntBASIC3.84□□□□□ -1.79
SDC3O75056 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.84□□□□□ -1.79
SDC3O75056 AC090079.2-201ENST00000575289 768 ntBASIC3.84□□□□□ -1.79
SDC3O75056 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.84□□□□□ -1.79
SDC3O75056 EIF1P6-201ENST00000600054 334 ntBASIC3.84□□□□□ -1.79
SDC3O75056 MTATP6P2-201ENST00000603319 678 ntBASIC3.84□□□□□ -1.79
SDC3O75056 BNIP3P19-201ENST00000605397 577 ntBASIC3.84□□□□□ -1.79
SDC3O75056 AC084757.4-201ENST00000616350 526 ntBASIC3.84□□□□□ -1.79
SDC3O75056 AC018926.3-201ENST00000618841 406 ntBASIC3.84□□□□□ -1.79
SDC3O75056 AP000943.4-201ENST00000622912 357 ntBASIC3.84□□□□□ -1.79
SDC3O75056 AP003400.6-201ENST00000624698 740 ntBASIC3.84□□□□□ -1.79
SDC3O75056 MARK2P15-201ENST00000432204 2186 ntBASIC3.84□□□□□ -1.79
SDC3O75056 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SDC3O75056 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SDC3O75056 NMD3P1-201ENST00000439704 1488 ntBASIC3.84□□□□□ -1.8
SDC3O75056 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
SDC3O75056 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.84□□□□□ -1.8
SDC3O75056 MTCO1P14-201ENST00000441695 1559 ntBASIC3.84□□□□□ -1.8
SDC3O75056 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SDC3O75056 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SDC3O75056 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SDC3O75056 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SDC3O75056 AC016716.1-201ENST00000265882 708 ntBASIC3.83□□□□□ -1.8
SDC3O75056 AL512646.1-201ENST00000269395 1077 ntBASIC3.83□□□□□ -1.8
SDC3O75056 SNORA63.3-201ENST00000362682 132 ntBASIC3.83□□□□□ -1.8
SDC3O75056 RNU6-1339P-201ENST00000363574 91 ntBASIC3.83□□□□□ -1.8
SDC3O75056 SNORA51.12-201ENST00000384448 134 ntBASIC3.83□□□□□ -1.8
SDC3O75056 RPL21P17-201ENST00000397467 475 ntBASIC3.83□□□□□ -1.8
SDC3O75056 AMD1P2-201ENST00000412936 992 ntBASIC3.83□□□□□ -1.8
SDC3O75056 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.83□□□□□ -1.8
SDC3O75056 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.83□□□□□ -1.8
SDC3O75056 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.83□□□□□ -1.8
SDC3O75056 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SDC3O75056 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.83□□□□□ -1.8
SDC3O75056 AL050321.1-201ENST00000432363 400 ntBASIC3.83□□□□□ -1.8
SDC3O75056 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.83□□□□□ -1.8
SDC3O75056 RANP8-201ENST00000444720 713 ntBASIC3.83□□□□□ -1.8
SDC3O75056 RPL23AP15-201ENST00000450202 459 ntBASIC3.83□□□□□ -1.8
SDC3O75056 FABP3P2-201ENST00000453169 399 ntBASIC3.83□□□□□ -1.8
SDC3O75056 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.83□□□□□ -1.8
SDC3O75056 snoU13.7-201ENST00000459220 104 ntBASIC3.83□□□□□ -1.8
SDC3O75056 AC126121.1-201ENST00000482313 553 ntBASIC3.83□□□□□ -1.8
SDC3O75056 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.83□□□□□ -1.8
SDC3O75056 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.83□□□□□ -1.8
SDC3O75056 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.83□□□□□ -1.8
SDC3O75056 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.83□□□□□ -1.8
SDC3O75056 RN7SKP277-201ENST00000516895 283 ntBASIC3.83□□□□□ -1.8
SDC3O75056 SCARNA14-201ENST00000516903 136 ntBASIC3.83□□□□□ -1.8
SDC3O75056 AC022695.1-201ENST00000522089 237 ntBASIC3.83□□□□□ -1.8
SDC3O75056 MTND2P26-201ENST00000528255 1029 ntBASIC3.83□□□□□ -1.8
SDC3O75056 OR8I1P-201ENST00000529291 931 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms