Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RN7SL802P-201ENST00000577858 299 ntBASIC4.02□□□□□ -1.77
SSX4O60224 MIR4458-201ENST00000578872 75 ntBASIC4.02□□□□□ -1.77
SSX4O60224 MIR5699-201ENST00000578903 90 ntBASIC4.02□□□□□ -1.77
SSX4O60224 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.02□□□□□ -1.77
SSX4O60224 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.02□□□□□ -1.77
SSX4O60224 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSX4O60224 AC005332.6-201ENST00000613178 446 ntBASIC4.02□□□□□ -1.77
SSX4O60224 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.02□□□□□ -1.77
SSX4O60224 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SSX4O60224 MIR6830-201ENST00000636015 70 ntBASIC4.02□□□□□ -1.77
SSX4O60224 AC009452.1-201ENST00000640823 606 ntBASIC4.02□□□□□ -1.77
SSX4O60224 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSX4O60224 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.02□□□□□ -1.77
SSX4O60224 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.02□□□□□ -1.77
SSX4O60224 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSX4O60224 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSX4O60224 AC011978.2-201ENST00000569835 2054 ntBASIC4.02□□□□□ -1.77
SSX4O60224 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSX4O60224 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.02□□□□□ -1.77
SSX4O60224 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.02□□□□□ -1.77
SSX4O60224 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.02□□□□□ -1.77
SSX4O60224 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SSX4O60224 AL139811.1-201ENST00000424779 2299 ntBASIC4.01□□□□□ -1.77
SSX4O60224 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.01□□□□□ -1.77
SSX4O60224 SEPT7P7-201ENST00000420492 1301 ntBASIC4.01□□□□□ -1.77
SSX4O60224 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
SSX4O60224 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
SSX4O60224 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSX4O60224 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSX4O60224 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSX4O60224 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SSX4O60224 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSX4O60224 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
SSX4O60224 SNORA71.2-201ENST00000364941 134 ntBASIC4.01□□□□□ -1.77
SSX4O60224 RNA5SP22-201ENST00000365393 109 ntBASIC4.01□□□□□ -1.77
SSX4O60224 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SSX4O60224 RNU6-83P-201ENST00000384568 112 ntBASIC4.01□□□□□ -1.77
SSX4O60224 MIR129-1-201ENST00000384972 72 ntBASIC4.01□□□□□ -1.77
SSX4O60224 BTBD10P2-201ENST00000404779 676 ntBASIC4.01□□□□□ -1.77
SSX4O60224 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.01□□□□□ -1.77
SSX4O60224 RN7SKP267-201ENST00000410381 285 ntBASIC4.01□□□□□ -1.77
SSX4O60224 RNA5SP306-201ENST00000411087 107 ntBASIC4.01□□□□□ -1.77
SSX4O60224 AC073264.1-201ENST00000411508 416 ntBASIC4.01□□□□□ -1.77
SSX4O60224 AL591848.1-201ENST00000413092 322 ntBASIC4.01□□□□□ -1.77
SSX4O60224 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX4O60224 MTCO2P21-201ENST00000419780 677 ntBASIC4.01□□□□□ -1.77
SSX4O60224 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX4O60224 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.01□□□□□ -1.77
SSX4O60224 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX4O60224 AL451139.1-201ENST00000434718 346 ntBASIC4.01□□□□□ -1.77
SSX4O60224 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.01□□□□□ -1.77
SSX4O60224 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.01□□□□□ -1.77
SSX4O60224 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.01□□□□□ -1.77
SSX4O60224 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.01□□□□□ -1.77
SSX4O60224 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.01□□□□□ -1.77
SSX4O60224 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX4O60224 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.01□□□□□ -1.77
SSX4O60224 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.01□□□□□ -1.77
SSX4O60224 AC009963.2-201ENST00000453431 138 ntBASIC4.01□□□□□ -1.77
SSX4O60224 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX4O60224 AL133477.1-201ENST00000457472 514 ntBASIC4.01□□□□□ -1.77
SSX4O60224 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX4O60224 RPL23AP2-201ENST00000471227 466 ntBASIC4.01□□□□□ -1.77
SSX4O60224 AC103987.1-201ENST00000473394 348 ntBASIC4.01□□□□□ -1.77
SSX4O60224 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX4O60224 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.01□□□□□ -1.77
SSX4O60224 AC006499.6-201ENST00000511169 607 ntBASIC4.01□□□□□ -1.77
SSX4O60224 AC116353.3-201ENST00000511215 249 ntBASIC4.01□□□□□ -1.77
SSX4O60224 FABP5P12-201ENST00000515543 389 ntBASIC4.01□□□□□ -1.77
SSX4O60224 RNU6-1261P-201ENST00000517194 104 ntBASIC4.01□□□□□ -1.77
SSX4O60224 AC027309.2-201ENST00000520566 192 ntBASIC4.01□□□□□ -1.77
SSX4O60224 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX4O60224 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.01□□□□□ -1.77
SSX4O60224 LRRC34P1-201ENST00000542742 915 ntBASIC4.01□□□□□ -1.77
SSX4O60224 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX4O60224 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SSX4O60224 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX4O60224 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX4O60224 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.01□□□□□ -1.77
SSX4O60224 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX4O60224 AL020997.2-201ENST00000602607 184 ntBASIC4.01□□□□□ -1.77
SSX4O60224 MRPS35P3-201ENST00000603189 709 ntBASIC4.01□□□□□ -1.77
SSX4O60224 DUXAP3-201ENST00000603616 594 ntBASIC4.01□□□□□ -1.77
SSX4O60224 AC010201.1-201ENST00000605051 540 ntBASIC4.01□□□□□ -1.77
SSX4O60224 AL356218.2-201ENST00000605264 187 ntBASIC4.01□□□□□ -1.77
SSX4O60224 AC091946.2-201ENST00000606105 291 ntBASIC4.01□□□□□ -1.77
SSX4O60224 AP003392.5-201ENST00000607857 415 ntBASIC4.01□□□□□ -1.77
SSX4O60224 AL451074.6-201ENST00000608512 729 ntBASIC4.01□□□□□ -1.77
SSX4O60224 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.01□□□□□ -1.77
SSX4O60224 MLECP1-201ENST00000615893 709 ntBASIC4.01□□□□□ -1.77
SSX4O60224 AL138721.1-201ENST00000616756 179 ntBASIC4.01□□□□□ -1.77
SSX4O60224 AC109809.1-201ENST00000619665 545 ntBASIC4.01□□□□□ -1.77
SSX4O60224 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SSX4O60224 AC018555.1-201ENST00000567548 1980 ntBASIC4.01□□□□□ -1.77
SSX4O60224 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSX4O60224 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSX4O60224 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSX4O60224 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSX4O60224 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SSX4O60224 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms