Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LDB2O43679 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.35□□□□□ -1.71
LDB2O43679 MTCO1P49-201ENST00000523429 802 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.35□□□□□ -1.71
LDB2O43679 PHBP17-201ENST00000528576 541 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.35□□□□□ -1.71
LDB2O43679 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LDB2O43679 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LDB2O43679 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.35□□□□□ -1.71
LDB2O43679 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.35□□□□□ -1.71
LDB2O43679 VN1R90P-201ENST00000595717 726 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AC006539.2-201ENST00000601729 572 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AC113403.1-201ENST00000604910 193 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AC090948.1-201ENST00000607464 549 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AC004223.4-201ENST00000612426 332 ntBASIC4.35□□□□□ -1.71
LDB2O43679 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LDB2O43679 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AC006338.2-201ENST00000616864 791 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AC069209.1-201ENST00000619282 651 ntBASIC4.35□□□□□ -1.71
LDB2O43679 MIR7154-201ENST00000620673 73 ntBASIC4.35□□□□□ -1.71
LDB2O43679 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.35□□□□□ -1.71
LDB2O43679 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.35□□□□□ -1.71
LDB2O43679 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.35□□□□□ -1.71
LDB2O43679 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LDB2O43679 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LDB2O43679 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
LDB2O43679 AC104118.1-201ENST00000607625 1589 ntBASIC4.35□□□□□ -1.71
LDB2O43679 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.35□□□□□ -1.71
LDB2O43679 MFSD8-242ENST00000641690 4199 ntBASIC4.35□□□□□ -1.71
LDB2O43679 NEAT1-202ENST00000501122 22743 ntBASIC4.35□□□□□ -1.71
LDB2O43679 DBF4P1-201ENST00000412976 1892 ntBASIC4.35□□□□□ -1.71
LDB2O43679 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
LDB2O43679 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
LDB2O43679 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
LDB2O43679 LINC01355-201ENST00000566551 5444 ntBASIC4.34□□□□□ -1.71
LDB2O43679 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.34□□□□□ -1.71
LDB2O43679 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LDB2O43679 AL391994.1-201ENST00000254724 282 ntBASIC4.34□□□□□ -1.71
LDB2O43679 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LDB2O43679 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
LDB2O43679 RNU1-15P-201ENST00000353977 144 ntBASIC4.34□□□□□ -1.71
LDB2O43679 RNU6-621P-201ENST00000364752 109 ntBASIC4.34□□□□□ -1.71
LDB2O43679 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
LDB2O43679 RNA5SP146-201ENST00000410743 123 ntBASIC4.34□□□□□ -1.71
LDB2O43679 AL450992.3-201ENST00000413192 568 ntBASIC4.34□□□□□ -1.71
LDB2O43679 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.34□□□□□ -1.71
LDB2O43679 AC019178.2-201ENST00000423595 505 ntBASIC4.34□□□□□ -1.71
LDB2O43679 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.34□□□□□ -1.71
LDB2O43679 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.34□□□□□ -1.71
LDB2O43679 RPL23AP52-201ENST00000439311 478 ntBASIC4.34□□□□□ -1.71
LDB2O43679 AL591503.2-201ENST00000442314 1005 ntBASIC4.34□□□□□ -1.71
LDB2O43679 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.34□□□□□ -1.71
LDB2O43679 MTCO2P7-201ENST00000446518 666 ntBASIC4.34□□□□□ -1.71
LDB2O43679 AL034418.1-201ENST00000448675 860 ntBASIC4.34□□□□□ -1.71
LDB2O43679 AL354710.1-201ENST00000453641 246 ntBASIC4.34□□□□□ -1.71
LDB2O43679 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.34□□□□□ -1.71
LDB2O43679 AL445669.2-201ENST00000454425 421 ntBASIC4.34□□□□□ -1.71
LDB2O43679 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.34□□□□□ -1.71
LDB2O43679 RN7SL98P-201ENST00000462271 300 ntBASIC4.34□□□□□ -1.71
LDB2O43679 ACTG1P13-201ENST00000486987 1043 ntBASIC4.34□□□□□ -1.71
LDB2O43679 AC005912.1-201ENST00000495392 255 ntBASIC4.34□□□□□ -1.71
LDB2O43679 HNRNPKP5-201ENST00000515300 253 ntBASIC4.34□□□□□ -1.71
LDB2O43679 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.34□□□□□ -1.71
LDB2O43679 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.34□□□□□ -1.71
LDB2O43679 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.34□□□□□ -1.71
LDB2O43679 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.34□□□□□ -1.71
LDB2O43679 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.34□□□□□ -1.71
LDB2O43679 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.34□□□□□ -1.71
LDB2O43679 GTF2IP8-201ENST00000560687 584 ntBASIC4.34□□□□□ -1.71
LDB2O43679 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.34□□□□□ -1.71
LDB2O43679 AL590229.1-201ENST00000603497 542 ntBASIC4.34□□□□□ -1.71
LDB2O43679 AL390816.3-201ENST00000604527 1066 ntBASIC4.34□□□□□ -1.71
LDB2O43679 AC010738.1-201ENST00000604970 987 ntBASIC4.34□□□□□ -1.71
LDB2O43679 AL451086.1-201ENST00000605596 223 ntBASIC4.34□□□□□ -1.71
LDB2O43679 OR2AS2P-201ENST00000606902 342 ntBASIC4.34□□□□□ -1.71
LDB2O43679 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.34□□□□□ -1.71
LDB2O43679 MLECP1-201ENST00000615893 709 ntBASIC4.34□□□□□ -1.71
LDB2O43679 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.34□□□□□ -1.71
LDB2O43679 AC091931.1-201ENST00000623488 728 ntBASIC4.34□□□□□ -1.71
LDB2O43679 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
LDB2O43679 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.34□□□□□ -1.71
LDB2O43679 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.34□□□□□ -1.71
LDB2O43679 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.34□□□□□ -1.71
LDB2O43679 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LDB2O43679 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
LDB2O43679 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
LDB2O43679 AC090017.1-201ENST00000548612 1779 ntBASIC4.34□□□□□ -1.71
LDB2O43679 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.34□□□□□ -1.71
LDB2O43679 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LDB2O43679 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
LDB2O43679 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.33□□□□□ -1.72
LDB2O43679 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.33□□□□□ -1.72
LDB2O43679 AC006971.1-201ENST00000407916 4486 ntBASIC4.33□□□□□ -1.72
LDB2O43679 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.33□□□□□ -1.72
LDB2O43679 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LDB2O43679 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LDB2O43679 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LDB2O43679 Z95327.2-201ENST00000414579 1873 ntBASIC4.33□□□□□ -1.72
LDB2O43679 EIF2AP4-201ENST00000424793 1781 ntBASIC4.33□□□□□ -1.72
LDB2O43679 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms