Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AC012442.3-202ENST00000636742 206 ntBASIC4.05□□□□□ -1.76
CLDN3O15551 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.05□□□□□ -1.76
CLDN3O15551 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
CLDN3O15551 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN3O15551 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN3O15551 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
CLDN3O15551 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN3O15551 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CLDN3O15551 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLDN3O15551 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLDN3O15551 ZNF285B-201ENST00000561698 1767 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLDN3O15551 AL122126.1-201ENST00000546905 1318 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLDN3O15551 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
CLDN3O15551 SEC63P2-201ENST00000503863 1939 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CLDN3O15551 MIR1183-201ENST00000408856 89 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 RN7SKP27-201ENST00000410684 333 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 BTBD7P2-201ENST00000441962 620 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.04□□□□□ -1.76
CLDN3O15551 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.04□□□□□ -1.76
CLDN3O15551 AC239367.2-201ENST00000447309 705 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 AL500527.1-201ENST00000448532 255 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 snoU13.7-201ENST00000459220 104 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLDN3O15551 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.04□□□□□ -1.76
CLDN3O15551 PTGES3P3-201ENST00000511479 482 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 RNU1-95P-201ENST00000516357 160 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 RNU1-128P-201ENST00000516704 160 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 RN7SKP209-201ENST00000516888 304 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 RN7SKP277-201ENST00000516895 283 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 SNORA76.2-201ENST00000517095 137 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.04□□□□□ -1.76
CLDN3O15551 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.04□□□□□ -1.76
CLDN3O15551 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.04□□□□□ -1.76
CLDN3O15551 AC074029.1-201ENST00000552531 1044 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 SERPINE4P-201ENST00000554978 281 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.04□□□□□ -1.76
CLDN3O15551 MIR3158-1-201ENST00000583596 81 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.04□□□□□ -1.76
CLDN3O15551 AL359535.1-201ENST00000612100 1087 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.04□□□□□ -1.76
CLDN3O15551 C2orf27A-204ENST00000623058 969 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.04□□□□□ -1.76
CLDN3O15551 FAM157B-203ENST00000639350 358 ntBASIC4.04□□□□□ -1.76
CLDN3O15551 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.04□□□□□ -1.76
CLDN3O15551 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.04□□□□□ -1.76
CLDN3O15551 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.03□□□□□ -1.76
CLDN3O15551 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN3O15551 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.03□□□□□ -1.76
CLDN3O15551 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.03□□□□□ -1.76
CLDN3O15551 RNU6-356P-201ENST00000384140 107 ntBASIC4.03□□□□□ -1.76
CLDN3O15551 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN3O15551 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CLDN3O15551 RNU2-21P-201ENST00000410368 188 ntBASIC4.03□□□□□ -1.76
CLDN3O15551 RPL7P53-201ENST00000421245 739 ntBASIC4.03□□□□□ -1.76
CLDN3O15551 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN3O15551 ETF1P3-201ENST00000430422 1160 ntBASIC4.03□□□□□ -1.76
CLDN3O15551 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.03□□□□□ -1.76
CLDN3O15551 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN3O15551 RPL23AP15-201ENST00000450202 459 ntBASIC4.03□□□□□ -1.76
CLDN3O15551 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN3O15551 MTND2P30-201ENST00000456663 382 ntBASIC4.03□□□□□ -1.76
CLDN3O15551 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN3O15551 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN3O15551 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.03□□□□□ -1.76
CLDN3O15551 AC104108.1-201ENST00000509930 412 ntBASIC4.03□□□□□ -1.76
CLDN3O15551 Vault.1-201ENST00000516474 102 ntBASIC4.03□□□□□ -1.76
CLDN3O15551 SNORA67.7-201ENST00000516664 135 ntBASIC4.03□□□□□ -1.76
CLDN3O15551 MTND2P26-201ENST00000528255 1029 ntBASIC4.03□□□□□ -1.76
CLDN3O15551 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.03□□□□□ -1.76
CLDN3O15551 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.03□□□□□ -1.76
CLDN3O15551 CENPUP2-201ENST00000555897 1186 ntBASIC4.03□□□□□ -1.76
CLDN3O15551 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN3O15551 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN3O15551 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.03□□□□□ -1.76
CLDN3O15551 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN3O15551 OR2BH1P-201ENST00000608850 864 ntBASIC4.03□□□□□ -1.76
CLDN3O15551 AC006133.1-201ENST00000617106 264 ntBASIC4.03□□□□□ -1.76
CLDN3O15551 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN3O15551 AC121761.2-201ENST00000617300 689 ntBASIC4.03□□□□□ -1.76
CLDN3O15551 AC018926.3-201ENST00000618841 406 ntBASIC4.03□□□□□ -1.76
CLDN3O15551 AC073569.3-201ENST00000619055 682 ntBASIC4.03□□□□□ -1.76
CLDN3O15551 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.03□□□□□ -1.76
CLDN3O15551 AC017104.5-201ENST00000637647 639 ntBASIC4.03□□□□□ -1.76
CLDN3O15551 AP000553.6-201ENST00000641242 118 ntBASIC4.03□□□□□ -1.76
CLDN3O15551 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN3O15551 NSRP1P1-201ENST00000444067 1693 ntBASIC4.03□□□□□ -1.76
CLDN3O15551 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN3O15551 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.03□□□□□ -1.76
CLDN3O15551 AC046144.1-201ENST00000478559 1853 ntBASIC4.03□□□□□ -1.77
CLDN3O15551 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.03□□□□□ -1.77
CLDN3O15551 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
CLDN3O15551 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.03□□□□□ -1.77
CLDN3O15551 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.02□□□□□ -1.77
CLDN3O15551 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN3O15551 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN3O15551 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CLDN3O15551 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms