Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.79□□□□□ -1.96
SDCBPO00560 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SDCBPO00560 AC007899.1-201ENST00000412776 775 ntBASIC2.79□□□□□ -1.96
SDCBPO00560 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SDCBPO00560 RPS29P4-201ENST00000414733 161 ntBASIC2.79□□□□□ -1.96
SDCBPO00560 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.79□□□□□ -1.96
SDCBPO00560 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.79□□□□□ -1.96
SDCBPO00560 AC092641.1-201ENST00000440229 772 ntBASIC2.79□□□□□ -1.96
SDCBPO00560 AL353093.1-201ENST00000441292 436 ntBASIC2.79□□□□□ -1.96
SDCBPO00560 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SDCBPO00560 RPL21P23-201ENST00000446654 460 ntBASIC2.79□□□□□ -1.96
SDCBPO00560 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.79□□□□□ -1.96
SDCBPO00560 RN7SL542P-201ENST00000467147 294 ntBASIC2.79□□□□□ -1.96
SDCBPO00560 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC2.79□□□□□ -1.96
SDCBPO00560 AC078785.3-201ENST00000476607 425 ntBASIC2.79□□□□□ -1.96
SDCBPO00560 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.79□□□□□ -1.96
SDCBPO00560 RNA5SP217-201ENST00000515959 91 ntBASIC2.79□□□□□ -1.96
SDCBPO00560 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC2.79□□□□□ -1.96
SDCBPO00560 AP001207.2-201ENST00000519490 539 ntBASIC2.79□□□□□ -1.96
SDCBPO00560 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SDCBPO00560 AC245166.1-201ENST00000521012 253 ntBASIC2.79□□□□□ -1.96
SDCBPO00560 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.79□□□□□ -1.96
SDCBPO00560 AC015917.1-201ENST00000579654 510 ntBASIC2.79□□□□□ -1.96
SDCBPO00560 AC007423.1-201ENST00000605009 627 ntBASIC2.79□□□□□ -1.96
SDCBPO00560 AC015802.5-201ENST00000607478 399 ntBASIC2.79□□□□□ -1.96
SDCBPO00560 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC2.79□□□□□ -1.96
SDCBPO00560 AC123768.4-201ENST00000616244 701 ntBASIC2.79□□□□□ -1.96
SDCBPO00560 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SDCBPO00560 AC004943.3-201ENST00000624116 600 ntBASIC2.79□□□□□ -1.96
SDCBPO00560 AC107081.3-201ENST00000612715 2034 ntBASIC2.79□□□□□ -1.96
SDCBPO00560 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SDCBPO00560 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SDCBPO00560 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SDCBPO00560 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SDCBPO00560 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SDCBPO00560 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SDCBPO00560 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SDCBPO00560 DDX6P1-205ENST00000441966 1436 ntBASIC2.78□□□□□ -1.96
SDCBPO00560 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC2.78□□□□□ -1.96
SDCBPO00560 RNU4-35P-201ENST00000362588 141 ntBASIC2.78□□□□□ -1.96
SDCBPO00560 Y_RNA.126-201ENST00000363382 111 ntBASIC2.78□□□□□ -1.96
SDCBPO00560 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.78□□□□□ -1.96
SDCBPO00560 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SDCBPO00560 AC240504.1-201ENST00000395709 845 ntBASIC2.78□□□□□ -1.96
SDCBPO00560 AL583834.1-201ENST00000406943 343 ntBASIC2.78□□□□□ -1.96
SDCBPO00560 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.78□□□□□ -1.96
SDCBPO00560 RPL32P35-201ENST00000415214 394 ntBASIC2.78□□□□□ -1.96
SDCBPO00560 SYF2P2-201ENST00000417620 583 ntBASIC2.78□□□□□ -1.96
SDCBPO00560 RPL36AP36-201ENST00000418616 301 ntBASIC2.78□□□□□ -1.96
SDCBPO00560 AC009965.2-201ENST00000425328 970 ntBASIC2.78□□□□□ -1.96
SDCBPO00560 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.78□□□□□ -1.96
SDCBPO00560 ATP5JP1-201ENST00000431631 322 ntBASIC2.78□□□□□ -1.96
SDCBPO00560 KCTD10P1-201ENST00000434203 625 ntBASIC2.78□□□□□ -1.96
SDCBPO00560 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.78□□□□□ -1.96
SDCBPO00560 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.78□□□□□ -1.96
SDCBPO00560 AL359073.1-201ENST00000448036 403 ntBASIC2.78□□□□□ -1.96
SDCBPO00560 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
SDCBPO00560 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.78□□□□□ -1.96
SDCBPO00560 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC2.78□□□□□ -1.96
SDCBPO00560 IGKV2D-19-201ENST00000523346 262 ntBASIC2.78□□□□□ -1.96
SDCBPO00560 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.78□□□□□ -1.96
SDCBPO00560 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SDCBPO00560 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.78□□□□□ -1.96
SDCBPO00560 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.78□□□□□ -1.96
SDCBPO00560 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC2.78□□□□□ -1.96
SDCBPO00560 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.78□□□□□ -1.96
SDCBPO00560 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.78□□□□□ -1.96
SDCBPO00560 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.78□□□□□ -1.96
SDCBPO00560 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.78□□□□□ -1.96
SDCBPO00560 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.78□□□□□ -1.96
SDCBPO00560 AL049844.2-201ENST00000604280 628 ntBASIC2.78□□□□□ -1.96
SDCBPO00560 AC010680.4-201ENST00000605334 543 ntBASIC2.78□□□□□ -1.96
SDCBPO00560 AL365400.2-201ENST00000605604 902 ntBASIC2.78□□□□□ -1.96
SDCBPO00560 uc_338.1-201ENST00000612113 180 ntBASIC2.78□□□□□ -1.96
SDCBPO00560 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.78□□□□□ -1.96
SDCBPO00560 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.78□□□□□ -1.96
SDCBPO00560 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
SDCBPO00560 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.78□□□□□ -1.96
SDCBPO00560 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
SDCBPO00560 AC005183.1-201ENST00000603687 1979 ntBASIC2.78□□□□□ -1.97
SDCBPO00560 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.78□□□□□ -1.97
SDCBPO00560 CR383658.2-201ENST00000547576 1525 ntBASIC2.78□□□□□ -1.97
SDCBPO00560 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.77□□□□□ -1.97
SDCBPO00560 SEPT7P7-201ENST00000420492 1301 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.77□□□□□ -1.97
SDCBPO00560 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SDCBPO00560 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
SDCBPO00560 SNORA62.3-201ENST00000365110 153 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 SNORD17-201ENST00000390930 237 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.77□□□□□ -1.97
SDCBPO00560 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SDCBPO00560 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.77□□□□□ -1.97
SDCBPO00560 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.77□□□□□ -1.97
SDCBPO00560 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 ELOCP3-201ENST00000439303 348 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 Z99127.3-201ENST00000448158 395 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC2.77□□□□□ -1.97
SDCBPO00560 AC091564.1-201ENST00000464563 479 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 PLGLA-201ENST00000465668 449 ntBASIC2.77□□□□□ -1.97
SDCBPO00560 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms