Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AP001005.3-201ENST00000622049 129 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AC091965.5-201ENST00000624785 342 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 AC011477.1-204ENST00000623416 1325 ntBASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.42□□□□□ -1.7
TCRBV7S3A2A0A539 RAD17P1-201ENST00000418130 2042 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AC107081.3-201ENST00000612715 2034 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 SNORA4.1-201ENST00000364263 144 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 VDAC2P1-201ENST00000399358 958 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AL031577.2-201ENST00000404133 280 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AL035407.1-201ENST00000429211 571 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 TPTE2P5-203ENST00000458118 728 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 RPL35AP28-201ENST00000459730 331 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AC092754.2-201ENST00000463506 460 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 RPL30P11-201ENST00000495304 339 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 IFITM8P-201ENST00000522529 394 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 SLC2A13P1-201ENST00000531560 322 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AC074051.3-201ENST00000570238 358 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 MIR3915-201ENST00000578518 97 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AC069061.3-201ENST00000582254 823 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 NF1P5-201ENST00000588287 448 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AC006272.2-201ENST00000594725 163 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AC006270.3-201ENST00000605967 1036 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AC073530.2-201ENST00000623987 261 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 CASC19-222ENST00000641321 1173 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 LINC00561-201ENST00000565815 2738 ntBASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TCRBV7S3A2A0A539 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.4□□□□□ -1.7
TCRBV7S3A2A0A539 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.4□□□□□ -1.7
TCRBV7S3A2A0A539 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TCRBV7S3A2A0A539 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
TCRBV7S3A2A0A539 MAPK10-253ENST00000641010 4072 ntBASIC4.4□□□□□ -1.7
TCRBV7S3A2A0A539 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.4□□□□□ -1.7
TCRBV7S3A2A0A539 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.4□□□□□ -1.7
TCRBV7S3A2A0A539 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.4□□□□□ -1.7
TCRBV7S3A2A0A539 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TCRBV7S3A2A0A539 RNU6-500P-201ENST00000362349 107 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 ATP5F1P4-201ENST00000397288 746 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 RPL31P52-201ENST00000407532 367 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AL450338.1-201ENST00000407987 512 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 MIR1284-201ENST00000408337 120 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 OR6C64P-201ENST00000419708 825 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AC098826.1-201ENST00000433943 471 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AC023347.2-201ENST00000433994 462 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AL590103.1-201ENST00000434488 307 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AC011753.3-201ENST00000443436 406 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AC239809.1-201ENST00000450470 217 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 SLC31A1P1-201ENST00000451221 567 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 RPL18AP17-201ENST00000455326 198 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 OR52A4P-201ENST00000472867 958 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AC104164.2-201ENST00000496953 495 ntBASIC4.4□□□□□ -1.71
TCRBV7S3A2A0A539 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms