Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AL031985.3-201ENST00000565390 2449 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AL451142.2-201ENST00000429076 2090 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 STX3-208ENST00000641815 3236 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC126755.2-208ENST00000327792 462 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC138969.1-213ENST00000331436 462 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 SNORA66-201ENST00000384792 133 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 HMGB1P17-201ENST00000403495 628 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 RPS4XP9-201ENST00000405151 780 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AL023807.1-201ENST00000407932 359 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AL389915.1-201ENST00000422463 466 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC016712.1-201ENST00000431088 378 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 SNRPEP7-201ENST00000438350 220 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 UBE2V1P3-201ENST00000439651 417 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AL450023.3-201ENST00000440592 271 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 OR7E125P-201ENST00000443450 846 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AL592447.1-201ENST00000447592 540 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 SSXP1-201ENST00000453640 473 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 DNAJC19P1-201ENST00000455312 319 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 RN7SL354P-201ENST00000469282 294 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 MTND6P6-201ENST00000478031 263 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC140172.1-201ENST00000502928 141 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC010350.1-201ENST00000504908 231 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 RPL23AP53-201ENST00000521854 457 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 HSPE1P3-201ENST00000559254 309 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC018552.3-201ENST00000567416 561 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 MIR4737-201ENST00000583979 81 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC083760.1-201ENST00000589621 670 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC093765.1-201ENST00000603758 881 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC005191.1-201ENST00000603950 358 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC115286.1-201ENST00000604298 434 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 AC026951.1-201ENST00000559530 2459 ntBASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB1Q9Y5F3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 AL356473.1-201ENST00000406203 1408 ntBASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 AC007529.1-201ENST00000418574 2178 ntBASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 AC100778.3-201ENST00000580060 1750 ntBASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 FGF7P2-201ENST00000332473 296 ntBASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 RNA5SP391-201ENST00000363456 119 ntBASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 RNA5SP428-201ENST00000365129 132 ntBASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 RPL17P12-201ENST00000413391 526 ntBASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 RPS7P13-201ENST00000413955 498 ntBASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 UBTFL3-201ENST00000418934 1024 ntBASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 OR5BE1P-201ENST00000425977 939 ntBASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 RPL36P19-201ENST00000430744 301 ntBASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 PRELID3BP10-201ENST00000431957 584 ntBASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 USP9YP29-201ENST00000445112 563 ntBASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 EPS15P1-201ENST00000448836 336 ntBASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 MEMO1P3-201ENST00000459811 302 ntBASIC4.97□□□□□ -1.61
PCDHB1Q9Y5F3 APOOP2-201ENST00000461561 539 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms