Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
PHF8Q9UPP1 AC091812.1-201ENST00000432235 1948 ntBASIC8.33□□□□□ -1.08
PHF8Q9UPP1 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 AL442639.1-201ENST00000625030 1899 ntBASIC8.32□□□□□ -1.08
PHF8Q9UPP1 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 SELENOWP1-201ENST00000322792 252 ntBASIC8.32□□□□□ -1.08
PHF8Q9UPP1 RNA5SP375-201ENST00000362975 119 ntBASIC8.32□□□□□ -1.08
PHF8Q9UPP1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 HMGB1P20-201ENST00000402555 677 ntBASIC8.32□□□□□ -1.08
PHF8Q9UPP1 POLHP1-201ENST00000411806 470 ntBASIC8.32□□□□□ -1.08
PHF8Q9UPP1 MTCO3P19-201ENST00000415864 321 ntBASIC8.32□□□□□ -1.08
PHF8Q9UPP1 BMS1P17-202ENST00000416720 316 ntBASIC8.32□□□□□ -1.08
PHF8Q9UPP1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 TIMM9P1-201ENST00000436122 256 ntBASIC8.32□□□□□ -1.08
PHF8Q9UPP1 RPL23AP89-201ENST00000439324 255 ntBASIC8.32□□□□□ -1.08
PHF8Q9UPP1 AC026784.1-201ENST00000507986 352 ntBASIC8.32□□□□□ -1.08
PHF8Q9UPP1 OR51A1P-201ENST00000511110 946 ntBASIC8.32□□□□□ -1.08
PHF8Q9UPP1 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 AL137161.1-201ENST00000532231 390 ntBASIC8.32□□□□□ -1.08
PHF8Q9UPP1 DUX4L52-201ENST00000549363 777 ntBASIC8.32□□□□□ -1.08
PHF8Q9UPP1 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 MRPS21P9-201ENST00000571150 257 ntBASIC8.32□□□□□ -1.08
PHF8Q9UPP1 LARP7P2-201ENST00000575306 125 ntBASIC8.32□□□□□ -1.08
PHF8Q9UPP1 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 AC092747.3-201ENST00000603769 301 ntBASIC8.32□□□□□ -1.08
PHF8Q9UPP1 AC097467.4-201ENST00000605504 141 ntBASIC8.32□□□□□ -1.08
PHF8Q9UPP1 AC096772.1-201ENST00000609146 564 ntBASIC8.32□□□□□ -1.08
PHF8Q9UPP1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
PHF8Q9UPP1 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 UQCRC2P1-201ENST00000417777 1332 ntBASIC8.31□□□□□ -1.08
PHF8Q9UPP1 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 CREM-217ENST00000439705 2306 ntTSL 5 BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 Y_RNA.14-201ENST00000362415 103 ntBASIC8.31□□□□□ -1.08
PHF8Q9UPP1 Y_RNA.210-201ENST00000364161 110 ntBASIC8.31□□□□□ -1.08
PHF8Q9UPP1 MIR433-201ENST00000384837 93 ntBASIC8.31□□□□□ -1.08
PHF8Q9UPP1 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 EIF5P1-201ENST00000400019 1231 ntBASIC8.31□□□□□ -1.08
PHF8Q9UPP1 DPPA2P3-201ENST00000411853 655 ntBASIC8.31□□□□□ -1.08
PHF8Q9UPP1 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 AL035090.1-201ENST00000454835 332 ntBASIC8.31□□□□□ -1.08
PHF8Q9UPP1 AC079804.1-201ENST00000461922 436 ntBASIC8.31□□□□□ -1.08
PHF8Q9UPP1 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 RNU4ATAC-201ENST00000580972 127 ntBASIC8.31□□□□□ -1.08
PHF8Q9UPP1 AC104687.2-201ENST00000604442 342 ntBASIC8.31□□□□□ -1.08
PHF8Q9UPP1 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 AC009229.3-201ENST00000608056 282 ntBASIC8.31□□□□□ -1.08
PHF8Q9UPP1 AC024255.1-201ENST00000614376 102 ntBASIC8.31□□□□□ -1.08
PHF8Q9UPP1 AL138726.1-201ENST00000614873 333 ntBASIC8.31□□□□□ -1.08
PHF8Q9UPP1 NAA60-237ENST00000615865 326 ntTSL 5 BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 ATP5A1P2-202ENST00000616464 443 ntBASIC8.31□□□□□ -1.08
PHF8Q9UPP1 AL355365.1-201ENST00000616480 294 ntBASIC8.31□□□□□ -1.08
PHF8Q9UPP1 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 AL512643.1-201ENST00000635735 524 ntBASIC8.31□□□□□ -1.08
PHF8Q9UPP1 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 U6.104-201ENST00000637979 90 ntBASIC8.31□□□□□ -1.08
PHF8Q9UPP1 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 AC241584.2-201ENST00000637142 2090 ntBASIC8.31□□□□□ -1.08
PHF8Q9UPP1 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
PHF8Q9UPP1 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
PHF8Q9UPP1 AC016739.1-201ENST00000405359 345 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms