Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AC026801.2-201ENST00000515352 425 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AC027308.1-201ENST00000517993 110 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 IGKV3D-25-201ENST00000519599 235 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AC087575.1-201ENST00000585087 229 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AC012443.1-201ENST00000605605 231 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AP001264.1-201ENST00000620602 703 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AC034229.6-201ENST00000623704 224 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AC004158.1-201ENST00000564508 4319 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 CYP2G2P-201ENST00000594920 1485 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 PNPT1P2-201ENST00000456768 2050 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AC027575.3-201ENST00000583058 2747 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 Z97989.1-201ENST00000531702 2421 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 AC005225.5-201ENST00000623547 2225 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 ZNF734P-201ENST00000419494 1534 ntBASIC6.76□□□□□ -1.33
LIMD1Q9UGP4 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 AC023245.2-201ENST00000530760 2978 ntBASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 SNORA51.9-201ENST00000384295 124 ntBASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 RNU4-25P-201ENST00000410569 230 ntBASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 AC094019.1-201ENST00000434678 472 ntBASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 ATP5LP2-201ENST00000440646 311 ntBASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 AC019185.1-201ENST00000442718 389 ntBASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 Z95327.1-201ENST00000446082 482 ntBASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 AC097463.1-201ENST00000447288 481 ntBASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 RPL12P25-201ENST00000455592 494 ntBASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 RN7SL283P-201ENST00000489055 303 ntBASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 FTH1P24-201ENST00000503502 462 ntBASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 RFPL4AP5-201ENST00000514977 504 ntBASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 RNU6-1092P-201ENST00000516955 87 ntBASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 HMGN1P28-201ENST00000521340 364 ntBASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 AC139493.1-201ENST00000604368 397 ntBASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 AL138726.1-201ENST00000614873 333 ntBASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 TMEM75-201ENST00000624314 2165 ntBASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
LIMD1Q9UGP4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 Y_RNA.527-201ENST00000384573 102 ntBASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 RNU6-1222P-201ENST00000384615 107 ntBASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 MIR450B-201ENST00000401182 78 ntBASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 RPL6P29-201ENST00000414863 865 ntBASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 AC093151.1-201ENST00000427711 313 ntBASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.74□□□□□ -1.33
LIMD1Q9UGP4 RPL7P28-201ENST00000437739 740 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms