Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 OR4K15-201ENST00000305051 1216 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 RPS7P9-201ENST00000414704 586 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 RPL21P109-201ENST00000422213 475 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AC002075.2-201ENST00000425207 252 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AC073069.1-201ENST00000428657 441 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AL358472.1-201ENST00000431295 329 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AC234064.1-201ENST00000436312 247 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 ZNF886P-201ENST00000450781 723 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AC005229.2-201ENST00000456995 399 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 RN7SL98P-201ENST00000462271 300 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 RN7SL860P-201ENST00000473738 223 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AC079203.1-201ENST00000487972 404 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AF213884.1-201ENST00000488102 463 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 RN7SL810P-201ENST00000493031 276 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AC098862.1-201ENST00000504991 413 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 USP9YP5-201ENST00000511770 630 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 RNA5SP519-201ENST00000516480 119 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 RN7SKP83-201ENST00000516512 178 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 RN7SKP209-201ENST00000516888 304 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 OR5D15P-201ENST00000531671 942 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AL121576.1-201ENST00000556055 276 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AC110743.1-201ENST00000584870 478 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 CLIC4P2-201ENST00000601934 717 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 BNIP3P4-201ENST00000604946 565 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AC093424.1-201ENST00000604999 338 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AL592295.2-201ENST00000612578 206 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 MIR7973-1-201ENST00000614683 76 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 AL139089.1-201ENST00000620372 975 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 OR6C71P-202ENST00000641886 1107 ntBASIC3.83□□□□□ -1.8
NDE1Q9NXR1 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NDE1Q9NXR1 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC099786.3-201ENST00000565735 1410 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC104446.1-201ENST00000613728 1321 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 RNU6-236P-201ENST00000363886 106 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 U3.15-201ENST00000365398 212 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC114814.2-201ENST00000419195 485 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AL590762.4-201ENST00000425885 253 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 HIGD1AP12-201ENST00000427832 281 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 MOB1AP1-201ENST00000430903 535 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC008072.1-201ENST00000434254 824 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 H2AFZP6-201ENST00000444403 394 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AL591719.1-201ENST00000444669 744 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 ARL2BPP10-201ENST00000446487 531 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC091959.2-201ENST00000477363 321 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC068587.2-201ENST00000478386 781 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC021146.5-201ENST00000503544 545 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 KRT19P6-201ENST00000510983 209 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC112673.1-201ENST00000513168 575 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 RNU6-311P-201ENST00000516224 102 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 MTND3P12-201ENST00000559068 328 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 MIR4646-201ENST00000580775 63 ntBASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.82□□□□□ -1.8
NDE1Q9NXR1 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms