Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 POLR2KP1-201ENST00000553226 168 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 MTND4P33-201ENST00000556706 766 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AC009097.3-201ENST00000563557 1018 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 NIFKP6-201ENST00000598115 845 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AC009237.15-201ENST00000610252 501 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AC021755.4-201ENST00000616620 456 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 VN1R7P-201ENST00000619242 903 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AC120349.3-201ENST00000624377 529 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AF001550.2-201ENST00000636643 217 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 MTND4P8-201ENST00000514997 1362 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AC100871.1-201ENST00000507871 1456 ntBASIC4.1□□□□□ -1.75
SIX2Q9NPC8 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SIX2Q9NPC8 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 FAM91A3P-201ENST00000456826 2544 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 RNA5SP443-201ENST00000363083 132 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 RNU6-225P-201ENST00000384613 103 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 MTND4P13-201ENST00000402078 1023 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 HSPE1P8-201ENST00000406997 288 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 OR8F1P-201ENST00000425243 930 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 HIGD1AP12-201ENST00000427832 281 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 MTCYBP31-201ENST00000438855 1122 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AL929288.2-201ENST00000446368 407 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AC005002.1-201ENST00000447458 540 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AC112492.1-201ENST00000449607 712 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 MRPS36P3-201ENST00000519284 130 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AC018442.3-201ENST00000523025 183 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 MTCO3P15-201ENST00000526563 574 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 MTATP6P15-201ENST00000527233 835 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AC092747.2-201ENST00000545069 983 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AC009948.4-201ENST00000604692 675 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AC107952.2-201ENST00000606048 486 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 MIR7973-1-201ENST00000614683 76 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 AC013470.4-201ENST00000619978 986 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 OR1S1-201ENST00000624470 978 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 MTND2P41-201ENST00000637599 773 ntBASIC4.09□□□□□ -1.75
SIX2Q9NPC8 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIX2Q9NPC8 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
SIX2Q9NPC8 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.09□□□□□ -1.76
SIX2Q9NPC8 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SIX2Q9NPC8 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SIX2Q9NPC8 AC093535.2-201ENST00000624769 2326 ntBASIC4.09□□□□□ -1.76
SIX2Q9NPC8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX2Q9NPC8 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX2Q9NPC8 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX2Q9NPC8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX2Q9NPC8 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX2Q9NPC8 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX2Q9NPC8 RNU4-92P-201ENST00000363783 136 ntBASIC4.08□□□□□ -1.76
SIX2Q9NPC8 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX2Q9NPC8 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX2Q9NPC8 RN7SKP56-201ENST00000410513 331 ntBASIC4.08□□□□□ -1.76
SIX2Q9NPC8 Y_RNA.625-201ENST00000411256 107 ntBASIC4.08□□□□□ -1.76
SIX2Q9NPC8 AL356320.2-201ENST00000417263 507 ntBASIC4.08□□□□□ -1.76
SIX2Q9NPC8 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.08□□□□□ -1.76
SIX2Q9NPC8 RPL7P4-203ENST00000430239 730 ntBASIC4.08□□□□□ -1.76
SIX2Q9NPC8 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.08□□□□□ -1.76
SIX2Q9NPC8 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.08□□□□□ -1.76
SIX2Q9NPC8 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.08□□□□□ -1.76
SIX2Q9NPC8 AC009263.1-201ENST00000441193 1239 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms