Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 BMS1P19-201ENST00000433925 393 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 AL451139.1-201ENST00000434718 346 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 TCEA1P3-201ENST00000443005 880 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 KATNBL1P6-201ENST00000453433 915 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC097493.1-201ENST00000463958 372 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC068587.1-201ENST00000483613 781 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC073073.1-201ENST00000493920 463 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 RPL30P11-201ENST00000495304 339 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 NIFKP7-201ENST00000503365 834 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 CYCSP2-201ENST00000558168 301 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 EIF5A2P1-201ENST00000564027 460 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC012213.3-201ENST00000577199 777 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 MIR4472-2-201ENST00000582069 67 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC110743.1-201ENST00000584870 478 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC025165.5-201ENST00000602802 578 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 AL121873.1-201ENST00000616013 524 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC006338.2-201ENST00000616864 791 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 AL356121.2-201ENST00000624715 780 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VTA1Q9NP79 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 OR4G11P-202ENST00000642116 1414 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.37□□□□□ -1.55
VTA1Q9NP79 AC063976.2-201ENST00000425667 3556 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 MTND5P28-201ENST00000438005 1594 ntBASIC5.37□□□□□ -1.55
VTA1Q9NP79 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 RNU1-85P-201ENST00000364127 164 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 RNU6-921P-201ENST00000384361 107 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 RNU6-441P-201ENST00000384545 106 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 U3.22-201ENST00000391120 215 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 RPL21P67-201ENST00000402896 478 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 HMGB1P17-201ENST00000403495 628 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 UQCRBP1-201ENST00000421129 336 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 AL512649.1-201ENST00000428997 581 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 AC092641.1-201ENST00000440229 772 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 RNU6-956P-201ENST00000458868 103 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 RNA5SP269-201ENST00000459032 137 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 AL672167.3-201ENST00000465951 960 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 FTH1P24-201ENST00000503502 462 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VTA1Q9NP79 AC026412.2-201ENST00000512270 1075 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 AC091965.2-201ENST00000512324 613 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 AC060788.1-201ENST00000521318 469 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 ZNF705CP-201ENST00000530515 889 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 AC006349.1-201ENST00000555526 235 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 PARP1P2-201ENST00000556806 195 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 AC105129.1-201ENST00000560250 297 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 AP001004.1-201ENST00000582468 324 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 MIR3936-201ENST00000584304 110 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 AC005191.1-201ENST00000603950 358 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 AC128687.1-201ENST00000605304 619 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 AC087752.4-201ENST00000605911 462 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 AL353600.1-201ENST00000608148 251 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 AC078899.5-201ENST00000612475 178 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 AC068722.2-201ENST00000618734 544 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 AL034370.1-201ENST00000397254 1590 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VTA1Q9NP79 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 AC097504.1-201ENST00000515103 2415 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 AC026523.2-201ENST00000625039 7739 ntBASIC5.36□□□□□ -1.55
VTA1Q9NP79 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VTA1Q9NP79 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms