Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.96□□□□□ -1.94
KIAA1549Q9HCM3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.96□□□□□ -1.94
KIAA1549Q9HCM3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
KIAA1549Q9HCM3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 AC119744.1-201ENST00000454746 1715 ntBASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 GNG5P1-201ENST00000255500 204 ntBASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 RNU6-1279P-201ENST00000383917 103 ntBASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 RPS29P2-201ENST00000479278 136 ntBASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 OR5H3P-201ENST00000502817 919 ntBASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 AP001636.2-201ENST00000525517 696 ntBASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 PDCD5P1-201ENST00000543528 309 ntBASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 AC018692.3-201ENST00000623929 123 ntBASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 SAGE4P-201ENST00000442271 3381 ntBASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC2.95□□□□□ -1.94
KIAA1549Q9HCM3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 SNORA48.5-201ENST00000391143 135 ntBASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 AL035551.1-201ENST00000446931 348 ntBASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 RNU7-170P-201ENST00000459303 61 ntBASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 AC068724.1-201ENST00000487100 792 ntBASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 HMGB1P21-201ENST00000502313 581 ntBASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 BNIP3P19-201ENST00000605397 577 ntBASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 AL356321.1-201ENST00000621360 228 ntBASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 AC024341.1-201ENST00000526444 1552 ntBASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 AC015813.6-201ENST00000624409 5808 ntBASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 RNU6-146P-201ENST00000384602 108 ntBASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 AL353705.1-201ENST00000433468 480 ntBASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 TXNP1-201ENST00000441872 371 ntBASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 Z99127.3-201ENST00000448158 395 ntBASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 RN7SL863P-201ENST00000462370 296 ntBASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 RPL21P71-201ENST00000465598 459 ntBASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 S100A11P2-201ENST00000467589 312 ntBASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 AL135786.2-201ENST00000608422 615 ntBASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 AL592295.2-201ENST00000612578 206 ntBASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 AC019080.5-201ENST00000624891 757 ntBASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
KIAA1549Q9HCM3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 NCSTNP1-201ENST00000406229 144 ntBASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 OR6K4P-201ENST00000423179 955 ntBASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 AL162388.1-201ENST00000450912 352 ntBASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 MTCO3P20-201ENST00000454926 688 ntBASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 AP001486.1-201ENST00000463339 476 ntBASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 RPL23AP67-201ENST00000465341 474 ntBASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 AC021146.1-201ENST00000511202 716 ntBASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 PTGES3P3-201ENST00000511479 482 ntBASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 AC023141.12-201ENST00000512399 199 ntBASIC2.93□□□□□ -1.94
KIAA1549Q9HCM3 SCARNA13-201ENST00000516672 275 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms