Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS11Q9H270 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS11Q9H270 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS11Q9H270 AL389925.1-201ENST00000432257 728 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 AL161722.2-201ENST00000434731 981 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 RPL7AP61-201ENST00000443410 636 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 HMGN1P2-201ENST00000445197 310 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS11Q9H270 BX322784.1-201ENST00000455793 1077 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS11Q9H270 RPS20P24-201ENST00000457473 361 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
VPS11Q9H270 AC072039.1-201ENST00000477611 581 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS11Q9H270 HMGN1P12-201ENST00000499125 195 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 AC105252.1-201ENST00000503089 286 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 AC006427.1-201ENST00000514359 712 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 RNU6-202P-201ENST00000515998 96 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS11Q9H270 SOD1P3-201ENST00000518682 454 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 AC112191.2-201ENST00000522428 333 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 OR5M2P-201ENST00000529003 936 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.2□□□□□ -1.58
VPS11Q9H270 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS11Q9H270 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS11Q9H270 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS11Q9H270 AC091489.2-201ENST00000566263 604 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS11Q9H270 MIR4512-201ENST00000583257 77 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS11Q9H270 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
VPS11Q9H270 AC005261.5-201ENST00000596280 355 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS11Q9H270 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS11Q9H270 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS11Q9H270 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS11Q9H270 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS11Q9H270 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
VPS11Q9H270 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS11Q9H270 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS11Q9H270 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS11Q9H270 AP002001.2-201ENST00000529025 1469 ntBASIC5.2□□□□□ -1.58
VPS11Q9H270 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS11Q9H270 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS11Q9H270 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
VPS11Q9H270 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VPS11Q9H270 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS11Q9H270 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS11Q9H270 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS11Q9H270 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS11Q9H270 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
VPS11Q9H270 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS11Q9H270 RNU4-73P-201ENST00000363164 141 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 Y_RNA.453-201ENST00000384223 109 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 AL035079.1-201ENST00000405210 287 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 U3.32-201ENST00000408116 212 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS11Q9H270 AL358176.3-201ENST00000420757 454 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 AC233981.1-201ENST00000423224 461 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS11Q9H270 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS11Q9H270 AL390119.1-201ENST00000440329 312 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS11Q9H270 AL031584.1-201ENST00000447169 754 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 PTMAP3-201ENST00000447474 330 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS11Q9H270 DDX39BP2-208ENST00000453923 258 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 RPS15AP1-201ENST00000457423 391 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 PNPLA4P1-201ENST00000458328 305 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 RPS3AP17-201ENST00000472594 777 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS11Q9H270 RN7SL447P-201ENST00000494711 245 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 WBP1LP4-201ENST00000505043 344 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 AC011352.3-201ENST00000505162 593 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS11Q9H270 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS11Q9H270 SNORD46.2-201ENST00000516021 102 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 RNU6-358P-201ENST00000516564 75 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS11Q9H270 RPL23AP53-201ENST00000521854 457 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 HMGB1P40-201ENST00000525121 540 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS11Q9H270 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS11Q9H270 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS11Q9H270 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VPS11Q9H270 AC090515.3-201ENST00000560431 315 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.19□□□□□ -1.58
VPS11Q9H270 AC015720.2-201ENST00000567709 334 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 AC012182.1-201ENST00000570133 895 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS11Q9H270 AC012065.4-201ENST00000602445 679 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 AC019193.2-201ENST00000610012 634 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 Y_RNA.812-201ENST00000610788 101 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 Y_RNA.784-201ENST00000613803 101 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 AL442067.2-201ENST00000614033 363 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 AC091834.1-201ENST00000614543 472 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 Y_RNA.787-201ENST00000616522 101 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 Y_RNA.780-201ENST00000617336 101 ntBASIC5.19□□□□□ -1.58
VPS11Q9H270 MIR6861-201ENST00000618657 64 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms