Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 MIR4260-201ENST00000583107 67 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 HMGB2P1-201ENST00000591146 634 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AL589674.2-201ENST00000604304 337 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AC007363.1-201ENST00000604736 620 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AC104695.2-201ENST00000605056 775 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 uc_338.12-201ENST00000616344 181 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AC016769.4-201ENST00000616893 535 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 U6.42-201ENST00000618440 107 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 AC244258.1-201ENST00000637553 1071 ntBASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TRAIPQ9BWF2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 OR4K15-201ENST00000305051 1216 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 Y_RNA.450-201ENST00000384198 113 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 AC022028.1-201ENST00000412054 408 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 RPS12P23-201ENST00000419579 400 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 TRIM60P10Y-201ENST00000425589 751 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 TRIM60P8Y-201ENST00000436338 762 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 SLC25A18P1-201ENST00000449385 454 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 RPS23P6-201ENST00000466136 431 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 AC022215.1-201ENST00000481770 362 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 RN7SL466P-201ENST00000497546 295 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 RNU4-60P-201ENST00000517239 135 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 AP003034.1-201ENST00000534621 422 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 HMGB1P33-201ENST00000563485 527 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 MIR132-201ENST00000591554 101 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 FO393422.1-201ENST00000603908 708 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 RNA5SP108-201ENST00000605921 117 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 AL391813.2-201ENST00000609113 322 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 AC007014.2-201ENST00000615581 479 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 AC006338.1-201ENST00000618453 749 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 AL356321.1-201ENST00000621360 228 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 AL691477.1-201ENST00000624398 162 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 AC244517.1-201ENST00000606030 2086 ntBASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
TRAIPQ9BWF2 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 AL121886.1-201ENST00000358609 435 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 RNY3P13-201ENST00000365542 102 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 MIR19A-201ENST00000384878 82 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 RPL7P60-201ENST00000397636 735 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 CALM2P3-201ENST00000400429 449 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 AL078595.1-201ENST00000404458 226 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 MIR1277-201ENST00000408536 78 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 BEND7P1-201ENST00000422058 457 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 H2AFZP5-201ENST00000446960 382 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 TPT1P14-201ENST00000448018 505 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 AC140076.1-201ENST00000449897 361 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 FRG2FP-204ENST00000453982 852 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 AC022364.2-201ENST00000457963 554 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 snoU13.3-201ENST00000459441 104 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 AL049714.1-201ENST00000466686 347 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 RN7SL177P-201ENST00000476596 299 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 AC092989.1-201ENST00000481235 277 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 RPL38P3-201ENST00000484463 213 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 PRDX4P1-201ENST00000507189 574 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 FTH1P21-201ENST00000512179 511 ntBASIC6.36□□□□□ -1.39
TRAIPQ9BWF2 ARL2BPP6-201ENST00000512757 439 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms