Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 RNU6-1339P-201ENST00000363574 91 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 RPS26P8-201ENST00000393490 348 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 RNA5SP317-201ENST00000410176 116 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 RN7SKP177-201ENST00000410567 355 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 SNORA57.3-201ENST00000411095 141 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 RNA5SP311-201ENST00000411290 116 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC013262.1-201ENST00000426710 252 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 MTND1P33-201ENST00000446251 917 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AL162151.2-201ENST00000448875 158 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC006480.1-201ENST00000449887 378 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 RPS7P7-201ENST00000463499 571 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC010683.1-201ENST00000473673 378 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 HMGB1P38-201ENST00000490557 577 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 RNA5SP315-201ENST00000516340 116 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 RNA5SP312-201ENST00000517068 116 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 RAB9BP1-201ENST00000519581 626 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC010306.1-201ENST00000523223 1117 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 OR7E13P-201ENST00000526052 910 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC023161.2-201ENST00000551218 780 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 TMF1P1-201ENST00000576058 373 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC090666.1-201ENST00000578241 445 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC244505.7-201ENST00000599675 272 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 BNIP3P4-201ENST00000604946 565 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC243756.2-201ENST00000618406 463 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC018926.3-201ENST00000618841 406 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC092608.3-201ENST00000625017 386 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 MIR7641-1-201ENST00000627518 61 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 MIR492-201ENST00000638676 116 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 AL136520.1-201ENST00000600311 1322 ntBASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.1□□□□□ -1.91
HDHD3Q9BSH5 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 MIR372-201ENST00000362225 67 ntBASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 AL136116.1-201ENST00000403591 381 ntBASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 SNORA11C-201ENST00000408532 129 ntBASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 RNU2-21P-201ENST00000410368 188 ntBASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 OR51B8P-201ENST00000449892 769 ntBASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 RPL5P32-201ENST00000454085 879 ntBASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 AC008280.2-201ENST00000455473 307 ntBASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 AC099563.1-201ENST00000456086 418 ntBASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 CDC42P1-201ENST00000456658 548 ntBASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 OR9M1P-201ENST00000459641 921 ntBASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 PRDX3P4-201ENST00000470828 747 ntBASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 AC015724.1-201ENST00000478577 156 ntBASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 RPS27P23-201ENST00000487608 251 ntBASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 AC016550.1-201ENST00000505348 785 ntBASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 AC020593.1-201ENST00000507399 299 ntBASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 PRELID3BP4-201ENST00000515476 571 ntBASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.09□□□□□ -1.91
HDHD3Q9BSH5 AC091515.1-201ENST00000548110 679 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms