Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 OR52J1P-201ENST00000450596 932 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 MTND1P27-201ENST00000451117 902 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 ISCUP1-201ENST00000454451 448 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 AC005229.2-201ENST00000456995 399 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.44□□□□□ -1.86
VGLL1Q99990 AC104689.1-201ENST00000473356 768 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 AC090013.1-201ENST00000485147 480 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 SCARNA22-201ENST00000503991 125 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 IGBP1P5-201ENST00000507524 1000 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.44□□□□□ -1.86
VGLL1Q99990 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.44□□□□□ -1.86
VGLL1Q99990 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.44□□□□□ -1.86
VGLL1Q99990 RNA5SP135-201ENST00000517019 125 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.44□□□□□ -1.86
VGLL1Q99990 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.44□□□□□ -1.86
VGLL1Q99990 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VGLL1Q99990 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.44□□□□□ -1.86
VGLL1Q99990 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.44□□□□□ -1.86
VGLL1Q99990 HIGD1AP10-201ENST00000527837 282 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 AC100770.1-201ENST00000532310 322 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VGLL1Q99990 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.44□□□□□ -1.86
VGLL1Q99990 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.44□□□□□ -1.86
VGLL1Q99990 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.44□□□□□ -1.86
VGLL1Q99990 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.44□□□□□ -1.86
VGLL1Q99990 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
VGLL1Q99990 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.44□□□□□ -1.86
VGLL1Q99990 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.44□□□□□ -1.86
VGLL1Q99990 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.44□□□□□ -1.86
VGLL1Q99990 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.44□□□□□ -1.86
VGLL1Q99990 RSL24D1P11-201ENST00000591045 491 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 OR7E18P-201ENST00000592589 702 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.44□□□□□ -1.86
VGLL1Q99990 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.44□□□□□ -1.86
VGLL1Q99990 AC006539.2-201ENST00000601729 572 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 NTAN1P1-201ENST00000603150 646 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 AC103792.1-201ENST00000603591 919 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 AL391358.1-201ENST00000605342 190 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 RN7SKP299-201ENST00000606679 301 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.44□□□□□ -1.86
VGLL1Q99990 AC103591.3-201ENST00000608684 209 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 AP000894.4-201ENST00000610185 483 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.44□□□□□ -1.86
VGLL1Q99990 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.44□□□□□ -1.86
VGLL1Q99990 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
VGLL1Q99990 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
VGLL1Q99990 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VGLL1Q99990 AL031985.3-201ENST00000565390 2449 ntBASIC3.44□□□□□ -1.86
VGLL1Q99990 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
VGLL1Q99990 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.44□□□□□ -1.86
VGLL1Q99990 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
VGLL1Q99990 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
VGLL1Q99990 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
VGLL1Q99990 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VGLL1Q99990 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
VGLL1Q99990 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.44□□□□□ -1.86
VGLL1Q99990 AC046144.1-201ENST00000478559 1853 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
VGLL1Q99990 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VGLL1Q99990 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.43□□□□□ -1.86
VGLL1Q99990 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.43□□□□□ -1.86
VGLL1Q99990 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.43□□□□□ -1.86
VGLL1Q99990 AC107027.3-201ENST00000565095 3473 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 RNA5SP191-201ENST00000362585 102 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 RNU5D-1-201ENST00000363299 116 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 Y_RNA.311-201ENST00000365068 96 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 SNORD116-23-201ENST00000384645 92 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.43□□□□□ -1.86
VGLL1Q99990 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.43□□□□□ -1.86
VGLL1Q99990 BX510359.3-201ENST00000422168 306 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 RBMY2QP-201ENST00000429799 1147 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.43□□□□□ -1.86
VGLL1Q99990 RPL23AP25-201ENST00000430973 463 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 RPS24P8-201ENST00000431490 402 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 AL050321.1-201ENST00000432363 400 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 CBX1P4-201ENST00000439415 457 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.43□□□□□ -1.86
VGLL1Q99990 AC022431.1-201ENST00000450941 438 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.43□□□□□ -1.86
VGLL1Q99990 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.43□□□□□ -1.86
VGLL1Q99990 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.43□□□□□ -1.86
VGLL1Q99990 RPL23AP71-201ENST00000470966 469 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 RPL7AP6-201ENST00000477943 801 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.43□□□□□ -1.86
VGLL1Q99990 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.43□□□□□ -1.86
VGLL1Q99990 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.43□□□□□ -1.86
VGLL1Q99990 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.43□□□□□ -1.86
VGLL1Q99990 AC048346.1-201ENST00000510247 144 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 AC109471.1-201ENST00000511631 612 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 AC018797.3-201ENST00000513388 1241 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 AC008494.2-201ENST00000514544 370 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.43□□□□□ -1.86
VGLL1Q99990 RNU6-885P-201ENST00000516607 104 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.43□□□□□ -1.86
VGLL1Q99990 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.43□□□□□ -1.86
VGLL1Q99990 IGLV3-26-201ENST00000520756 302 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 AC090151.1-201ENST00000520784 730 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.43□□□□□ -1.86
VGLL1Q99990 AP001880.2-201ENST00000538233 448 ntBASIC3.43□□□□□ -1.86
VGLL1Q99990 AC008033.2-201ENST00000542626 177 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms