Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC069499.1-201ENST00000489433 509 ntBASIC5.21□□□□□ -1.58
IFT140Q96RY7 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.21□□□□□ -1.58
IFT140Q96RY7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
IFT140Q96RY7 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.21□□□□□ -1.58
IFT140Q96RY7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.21□□□□□ -1.58
IFT140Q96RY7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC5.21□□□□□ -1.58
IFT140Q96RY7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC5.21□□□□□ -1.58
IFT140Q96RY7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.21□□□□□ -1.58
IFT140Q96RY7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
IFT140Q96RY7 AC090971.4-201ENST00000560291 1800 ntBASIC5.21□□□□□ -1.58
IFT140Q96RY7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
IFT140Q96RY7 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
IFT140Q96RY7 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
IFT140Q96RY7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
IFT140Q96RY7 OR13C3-201ENST00000374781 1108 ntBASIC5.2□□□□□ -1.58
IFT140Q96RY7 SNORD67-201ENST00000390833 111 ntBASIC5.2□□□□□ -1.58
IFT140Q96RY7 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC5.2□□□□□ -1.58
IFT140Q96RY7 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.2□□□□□ -1.58
IFT140Q96RY7 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
IFT140Q96RY7 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
IFT140Q96RY7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.2□□□□□ -1.58
IFT140Q96RY7 AC083906.5-201ENST00000503722 328 ntBASIC5.2□□□□□ -1.58
IFT140Q96RY7 AC114781.4-201ENST00000513707 639 ntBASIC5.2□□□□□ -1.58
IFT140Q96RY7 SNORA70.19-201ENST00000516717 90 ntBASIC5.2□□□□□ -1.58
IFT140Q96RY7 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.2□□□□□ -1.58
IFT140Q96RY7 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.2□□□□□ -1.58
IFT140Q96RY7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.2□□□□□ -1.58
IFT140Q96RY7 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
IFT140Q96RY7 AC106785.3-201ENST00000564064 847 ntBASIC5.2□□□□□ -1.58
IFT140Q96RY7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.2□□□□□ -1.58
IFT140Q96RY7 AC124856.1-201ENST00000600819 896 ntBASIC5.2□□□□□ -1.58
IFT140Q96RY7 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
IFT140Q96RY7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
IFT140Q96RY7 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
IFT140Q96RY7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC5.2□□□□□ -1.58
IFT140Q96RY7 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
IFT140Q96RY7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
IFT140Q96RY7 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.2□□□□□ -1.58
IFT140Q96RY7 DNAJC19P1-201ENST00000455312 319 ntBASIC5.2□□□□□ -1.58
IFT140Q96RY7 RPL7P47-201ENST00000497299 556 ntBASIC5.2□□□□□ -1.58
IFT140Q96RY7 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.2□□□□□ -1.58
IFT140Q96RY7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.2□□□□□ -1.58
IFT140Q96RY7 BNIP3P38-201ENST00000601117 544 ntBASIC5.2□□□□□ -1.58
IFT140Q96RY7 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.2□□□□□ -1.58
IFT140Q96RY7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC5.19□□□□□ -1.58
IFT140Q96RY7 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
IFT140Q96RY7 SNORA18.3-201ENST00000384122 132 ntBASIC5.19□□□□□ -1.58
IFT140Q96RY7 BMS1P22-201ENST00000414726 313 ntBASIC5.19□□□□□ -1.58
IFT140Q96RY7 AC017078.1-201ENST00000416146 368 ntBASIC5.19□□□□□ -1.58
IFT140Q96RY7 AC063976.3-201ENST00000426849 329 ntBASIC5.19□□□□□ -1.58
IFT140Q96RY7 USP12PY-201ENST00000427677 1064 ntBASIC5.19□□□□□ -1.58
IFT140Q96RY7 AC022018.1-201ENST00000430685 241 ntBASIC5.19□□□□□ -1.58
IFT140Q96RY7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.19□□□□□ -1.58
IFT140Q96RY7 RAB28P3-201ENST00000448325 597 ntBASIC5.19□□□□□ -1.58
IFT140Q96RY7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.19□□□□□ -1.58
IFT140Q96RY7 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
IFT140Q96RY7 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.19□□□□□ -1.58
IFT140Q96RY7 AC007619.2-201ENST00000605743 379 ntBASIC5.19□□□□□ -1.58
IFT140Q96RY7 AC099654.11-201ENST00000638857 294 ntBASIC5.19□□□□□ -1.58
IFT140Q96RY7 AL049780.3-201ENST00000624612 1583 ntBASIC5.19□□□□□ -1.58
IFT140Q96RY7 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.18□□□□□ -1.58
IFT140Q96RY7 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
IFT140Q96RY7 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
IFT140Q96RY7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
IFT140Q96RY7 AF117829.1-206ENST00000621883 3802 ntBASIC5.18□□□□□ -1.58
IFT140Q96RY7 HMGN2P8-201ENST00000391458 268 ntBASIC5.18□□□□□ -1.58
IFT140Q96RY7 OR2X1P-201ENST00000421144 687 ntBASIC5.18□□□□□ -1.58
IFT140Q96RY7 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.18□□□□□ -1.58
IFT140Q96RY7 AC010095.1-201ENST00000443543 144 ntBASIC5.18□□□□□ -1.58
IFT140Q96RY7 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.18□□□□□ -1.58
IFT140Q96RY7 EEF1B2P7-201ENST00000451177 676 ntBASIC5.18□□□□□ -1.58
IFT140Q96RY7 RPS3AP50-201ENST00000487064 803 ntBASIC5.18□□□□□ -1.58
IFT140Q96RY7 AC107934.2-201ENST00000518653 310 ntBASIC5.18□□□□□ -1.58
IFT140Q96RY7 AP000859.1-201ENST00000525536 307 ntBASIC5.18□□□□□ -1.58
IFT140Q96RY7 OR10D4P-201ENST00000525892 951 ntBASIC5.18□□□□□ -1.58
IFT140Q96RY7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.18□□□□□ -1.58
IFT140Q96RY7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC5.18□□□□□ -1.58
IFT140Q96RY7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
IFT140Q96RY7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
IFT140Q96RY7 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
IFT140Q96RY7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC5.17□□□□□ -1.58
IFT140Q96RY7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
IFT140Q96RY7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
IFT140Q96RY7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
IFT140Q96RY7 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.17□□□□□ -1.58
IFT140Q96RY7 AL672167.1-206ENST00000356293 943 ntBASIC5.17□□□□□ -1.58
IFT140Q96RY7 RNU4-44P-201ENST00000363050 141 ntBASIC5.17□□□□□ -1.58
IFT140Q96RY7 SNORA70B-201ENST00000384210 135 ntBASIC5.17□□□□□ -1.58
IFT140Q96RY7 RSL24D1P4-201ENST00000400938 484 ntBASIC5.17□□□□□ -1.58
IFT140Q96RY7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.17□□□□□ -1.58
IFT140Q96RY7 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.17□□□□□ -1.58
IFT140Q96RY7 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.17□□□□□ -1.58
IFT140Q96RY7 IFNNP1-201ENST00000429219 553 ntBASIC5.17□□□□□ -1.58
IFT140Q96RY7 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.17□□□□□ -1.58
IFT140Q96RY7 TRBV12-1-201ENST00000479785 344 ntBASIC5.17□□□□□ -1.58
IFT140Q96RY7 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
IFT140Q96RY7 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.17□□□□□ -1.58
IFT140Q96RY7 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.17□□□□□ -1.58
IFT140Q96RY7 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
IFT140Q96RY7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms