Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNX18Q96RF0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNX18Q96RF0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX18Q96RF0 AC135352.1-201ENST00000506173 1418 ntBASIC4.54□□□□□ -1.68
SNX18Q96RF0 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.54□□□□□ -1.68
SNX18Q96RF0 AC092447.7-201ENST00000422212 1621 ntBASIC4.54□□□□□ -1.68
SNX18Q96RF0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
SNX18Q96RF0 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX18Q96RF0 ZNF37BP-203ENST00000452306 1352 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNX18Q96RF0 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
SNX18Q96RF0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.53□□□□□ -1.68
SNX18Q96RF0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX18Q96RF0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.53□□□□□ -1.68
SNX18Q96RF0 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNX18Q96RF0 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SNX18Q96RF0 FGF7P2-201ENST00000332473 296 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 U3.2-201ENST00000362981 210 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 RNU6-501P-201ENST00000364072 100 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX18Q96RF0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNX18Q96RF0 MIR506-201ENST00000384998 124 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 MIR600-201ENST00000385007 98 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 MIR765-201ENST00000390226 114 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 AC136624.1-201ENST00000400791 413 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 RNU2-66P-201ENST00000410650 161 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.53□□□□□ -1.68
SNX18Q96RF0 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.53□□□□□ -1.68
SNX18Q96RF0 UBTFL3-201ENST00000418934 1024 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.53□□□□□ -1.68
SNX18Q96RF0 RPS12P5-201ENST00000423449 371 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 AC005033.1-201ENST00000428904 813 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX18Q96RF0 AL365184.2-201ENST00000431139 435 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 MTND1P28-201ENST00000435623 950 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX18Q96RF0 RPS29P9-201ENST00000440360 171 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 KNOP1P3-201ENST00000446933 426 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX18Q96RF0 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX18Q96RF0 SSXP1-201ENST00000453640 473 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 HMGN3P1-201ENST00000453847 193 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 AL356981.1-201ENST00000454879 684 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 UBTFL6-201ENST00000477929 1024 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.53□□□□□ -1.68
SNX18Q96RF0 RPL9P33-201ENST00000484311 566 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 AC096751.1-202ENST00000502691 1067 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNX18Q96RF0 AC002456.2-201ENST00000509356 380 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 KRT19P6-201ENST00000510983 209 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNX18Q96RF0 ENPP7P9-201ENST00000514456 627 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 RNU6-583P-201ENST00000516012 92 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 ARL2BPP5-201ENST00000523141 481 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 AC087276.1-201ENST00000529659 480 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 AC016957.1-201ENST00000534895 309 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 AC090502.2-201ENST00000549267 280 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 AC074029.1-201ENST00000552531 1044 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX18Q96RF0 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX18Q96RF0 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.53□□□□□ -1.68
SNX18Q96RF0 AC012065.4-201ENST00000602445 679 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 AL596327.1-201ENST00000603629 213 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 AC024940.4-201ENST00000605507 246 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 AC015813.4-201ENST00000610469 179 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 U6atac.1-201ENST00000616025 117 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX18Q96RF0 AC068870.2-201ENST00000620635 389 ntBASIC4.53□□□□□ -1.68
SNX18Q96RF0 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.53□□□□□ -1.68
SNX18Q96RF0 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.53□□□□□ -1.68
SNX18Q96RF0 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX18Q96RF0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SNX18Q96RF0 MTCO1P14-201ENST00000441695 1559 ntBASIC4.53□□□□□ -1.69
SNX18Q96RF0 MTND4P16-201ENST00000466108 1367 ntBASIC4.53□□□□□ -1.69
SNX18Q96RF0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
SNX18Q96RF0 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.52□□□□□ -1.69
SNX18Q96RF0 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.52□□□□□ -1.69
SNX18Q96RF0 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.52□□□□□ -1.69
SNX18Q96RF0 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SNX18Q96RF0 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SNX18Q96RF0 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.52□□□□□ -1.69
SNX18Q96RF0 AC103591.2-201ENST00000265259 766 ntBASIC4.52□□□□□ -1.69
SNX18Q96RF0 SNORA17.1-201ENST00000362945 126 ntBASIC4.52□□□□□ -1.69
SNX18Q96RF0 AL645733.1-201ENST00000402250 217 ntBASIC4.52□□□□□ -1.69
SNX18Q96RF0 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNX18Q96RF0 DUTP5-201ENST00000406790 469 ntBASIC4.52□□□□□ -1.69
SNX18Q96RF0 RNU2-28P-201ENST00000410457 189 ntBASIC4.52□□□□□ -1.69
SNX18Q96RF0 RPL6P29-201ENST00000414863 865 ntBASIC4.52□□□□□ -1.69
SNX18Q96RF0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SNX18Q96RF0 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.52□□□□□ -1.69
SNX18Q96RF0 LINC00993-201ENST00000420453 540 ntBASIC4.52□□□□□ -1.69
SNX18Q96RF0 NIPA2P1-201ENST00000426223 976 ntBASIC4.52□□□□□ -1.69
SNX18Q96RF0 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.52□□□□□ -1.69
SNX18Q96RF0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.52□□□□□ -1.69
SNX18Q96RF0 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.52□□□□□ -1.69
SNX18Q96RF0 BMS1P19-201ENST00000433925 393 ntBASIC4.52□□□□□ -1.69
SNX18Q96RF0 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms