Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 NPM1P17-201ENST00000479221 602 ntBASIC3.45□□□□□ -1.86
COL21A1Q96P44 AC093663.2-201ENST00000484625 313 ntBASIC3.45□□□□□ -1.86
COL21A1Q96P44 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 MTCO1P31-201ENST00000506355 492 ntBASIC3.45□□□□□ -1.86
COL21A1Q96P44 OR5H4P-201ENST00000510851 923 ntBASIC3.45□□□□□ -1.86
COL21A1Q96P44 OR5AP1P-201ENST00000529730 940 ntBASIC3.45□□□□□ -1.86
COL21A1Q96P44 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 MIR5187-201ENST00000583479 76 ntBASIC3.45□□□□□ -1.86
COL21A1Q96P44 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 AC015802.5-201ENST00000607478 399 ntBASIC3.45□□□□□ -1.86
COL21A1Q96P44 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 AL713922.2-201ENST00000619384 716 ntBASIC3.45□□□□□ -1.86
COL21A1Q96P44 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
COL21A1Q96P44 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL21A1Q96P44 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.45□□□□□ -1.86
COL21A1Q96P44 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL21A1Q96P44 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
COL21A1Q96P44 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 DCAF13P3-201ENST00000561147 1334 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 RIOK3P1-201ENST00000418778 1528 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL21A1Q96P44 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COL21A1Q96P44 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 AC073073.2-201ENST00000609827 2578 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL21A1Q96P44 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL21A1Q96P44 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COL21A1Q96P44 RNU6-40P-201ENST00000384254 107 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 RN7SKP177-201ENST00000410567 355 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 CYCSP19-201ENST00000411715 316 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 AC004022.2-201ENST00000413824 193 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 AC234782.4-201ENST00000417646 1048 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 PTP4A1P5-201ENST00000420305 455 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 OR4F13P-201ENST00000428478 931 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 FO393419.3-201ENST00000428741 282 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 AC099563.1-201ENST00000456086 418 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COL21A1Q96P44 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 RPS3AP50-201ENST00000487064 803 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 RPL23AP73-201ENST00000492507 471 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 SAP18P1-201ENST00000512058 390 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 AP000889.1-201ENST00000530968 660 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 AC008011.1-201ENST00000545989 227 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 NOP56P3-201ENST00000549457 385 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 AL121594.4-201ENST00000556211 1196 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 TRAV15-201ENST00000556680 249 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 MIR5047-201ENST00000579212 100 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 AL392112.1-201ENST00000605115 829 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 BNIP3P19-201ENST00000605397 577 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 BX322635.1-201ENST00000605804 496 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.44□□□□□ -1.86
COL21A1Q96P44 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL21A1Q96P44 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL21A1Q96P44 ZNF33CP-201ENST00000432492 2030 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COL21A1Q96P44 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL21A1Q96P44 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.44□□□□□ -1.86
COL21A1Q96P44 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.43□□□□□ -1.86
COL21A1Q96P44 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
COL21A1Q96P44 SNORA70.4-201ENST00000365509 134 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 MIR670-201ENST00000390142 98 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 RNU6-328P-201ENST00000390887 106 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 SOD2P1-201ENST00000396543 562 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 TAF9BP2-201ENST00000400856 499 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 RNU2-65P-201ENST00000410162 185 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 RNU2-17P-201ENST00000410290 190 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.43□□□□□ -1.86
COL21A1Q96P44 AC006989.1-201ENST00000427212 131 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 ELOCP11-201ENST00000436690 332 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 USP9YP7-201ENST00000436723 430 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 RPL7P29-201ENST00000437151 728 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.43□□□□□ -1.86
COL21A1Q96P44 ELOCP16-201ENST00000444494 332 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 USP9YP32-201ENST00000452432 430 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 UBDP1-202ENST00000457888 382 ntBASIC3.43□□□□□ -1.86
COL21A1Q96P44 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.43□□□□□ -1.86
COL21A1Q96P44 AL049830.2-201ENST00000480072 201 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms