Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
VMP1Q96GC9 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VMP1Q96GC9 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VMP1Q96GC9 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
VMP1Q96GC9 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 RPL18P10-201ENST00000425606 538 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 AC006548.1-201ENST00000427470 102 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 USP9YP31-201ENST00000431405 881 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 MTCYBP15-201ENST00000433123 1127 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 HMGB1P12-201ENST00000438594 598 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 snoU13.24-201ENST00000458998 104 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 AL136126.1-201ENST00000473603 402 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 AC010301.1-201ENST00000473936 355 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 AL049830.2-201ENST00000480072 201 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 HMGB1P22-201ENST00000505315 124 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 AC093840.1-201ENST00000511599 336 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 IGLVIV-65-201ENST00000517313 360 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 AP003355.1-201ENST00000518956 587 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 MIR4277-201ENST00000578298 84 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 AP001160.4-201ENST00000596971 382 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 AC090948.1-201ENST00000607464 549 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 AL590282.1-201ENST00000610379 1136 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 AC018926.1-201ENST00000616335 435 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 CR381572.1-201ENST00000625098 102 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VMP1Q96GC9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VMP1Q96GC9 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VMP1Q96GC9 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.17□□□□□ -1.74
VMP1Q96GC9 AC139769.1-204ENST00000472297 1931 ntBASIC4.17□□□□□ -1.74
VMP1Q96GC9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VMP1Q96GC9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VMP1Q96GC9 AC138915.3-201ENST00000562908 1389 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VMP1Q96GC9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
VMP1Q96GC9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VMP1Q96GC9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
VMP1Q96GC9 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 RNA5SP235-201ENST00000365411 114 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 SNORD116-23-201ENST00000384645 92 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 AP000567.1-201ENST00000406413 156 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 RNU6-575P-201ENST00000411326 105 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 AC092638.1-201ENST00000411966 1275 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 AL133384.1-201ENST00000412744 351 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 JKAMPP1-201ENST00000413804 919 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 TMSB10P2-201ENST00000416049 131 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 AL035410.1-201ENST00000427409 427 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 UBE2V1P6-201ENST00000430840 422 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 RPL23AP16-201ENST00000441715 421 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 MTCO3P2-201ENST00000457365 171 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 AC079804.1-201ENST00000461922 436 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 RPL21P104-201ENST00000464143 478 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 NDUFA5P9-201ENST00000472609 340 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VMP1Q96GC9 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VMP1Q96GC9 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VMP1Q96GC9 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 RNU6-467P-201ENST00000517027 110 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 ZNF705CP-201ENST00000530515 889 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VMP1Q96GC9 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 AL360157.1-201ENST00000565962 87 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 AC093519.1-201ENST00000566109 298 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 AC010735.1-201ENST00000567305 1026 ntBASIC4.16□□□□□ -1.74
VMP1Q96GC9 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.16□□□□□ -1.74
VMP1Q96GC9 HMGB1P50-201ENST00000605814 607 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms