Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 NPM1P6-201ENST00000521088 871 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AP003392.2-201ENST00000527269 208 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 OR4A45P-201ENST00000529954 901 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 LSM6P2-201ENST00000552208 177 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AL389895.1-201ENST00000554127 252 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 EDDM3DP-201ENST00000554692 434 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AC009117.1-201ENST00000563948 554 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 MIR5699-201ENST00000578903 90 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 MIR3934-201ENST00000579806 107 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AC022726.1-201ENST00000587475 207 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AC012065.4-201ENST00000602445 679 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 FAM25E-202ENST00000608562 189 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AC087241.4-201ENST00000612441 480 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 Z99129.1-201ENST00000612510 255 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AC012414.7-202ENST00000622705 1090 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 AP001784.1-201ENST00000624107 428 ntBASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CTHRC1Q96CG8 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 Y_RNA.3-201ENST00000362331 103 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 RNU6-984P-201ENST00000363236 109 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 RNA5SP87-201ENST00000384155 118 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 SNORA75-201ENST00000384158 137 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 RNU6-441P-201ENST00000384545 106 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 MIR649-201ENST00000384843 97 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 U3.30-201ENST00000391308 210 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 OR6C69P-201ENST00000394268 893 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AC025750.1-201ENST00000399891 379 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AL139128.1-201ENST00000413921 941 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 COX6B1P1-201ENST00000415962 213 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 OR2AH1P-201ENST00000425717 928 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AC104837.2-201ENST00000427236 424 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 SNRPEP7-201ENST00000438350 220 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 CEACAMP9-201ENST00000442990 513 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 RPS26P56-201ENST00000444468 240 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 MRPL48P1-201ENST00000445390 636 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 RPL7L1P1-201ENST00000448259 785 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 RPS5P7-201ENST00000456664 608 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 MEMO1P3-201ENST00000459811 302 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AC092324.1-201ENST00000468671 324 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 RN7SL346P-201ENST00000491561 294 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AC020890.1-201ENST00000491837 504 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 PRELID3BP7-201ENST00000503606 469 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 RNU6-150P-201ENST00000516237 95 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 BNIP3P1-201ENST00000547295 580 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 EIF1P4-201ENST00000572664 335 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 MIR4637-201ENST00000582405 84 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AC138932.5-201ENST00000617759 563 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AL049536.1-201ENST00000625043 744 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 AC092447.7-201ENST00000422212 1621 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 MTND4P16-201ENST00000466108 1367 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 PHKBP1-201ENST00000450951 1951 ntBASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CTHRC1Q96CG8 SAMMSON-226ENST00000642089 1582 ntBASIC4.48□□□□□ -1.69
CTHRC1Q96CG8 THAP12P5-201ENST00000405864 2275 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms