Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.75□□□□□ -1.65
ATG4AQ8WYN0 RPL7P50-201ENST00000600588 727 ntBASIC4.75□□□□□ -1.65
ATG4AQ8WYN0 AC013244.1-201ENST00000604279 193 ntBASIC4.75□□□□□ -1.65
ATG4AQ8WYN0 AC008966.2-201ENST00000606157 453 ntBASIC4.75□□□□□ -1.65
ATG4AQ8WYN0 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.75□□□□□ -1.65
ATG4AQ8WYN0 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4AQ8WYN0 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4AQ8WYN0 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.75□□□□□ -1.65
ATG4AQ8WYN0 AC010678.1-201ENST00000614118 713 ntBASIC4.75□□□□□ -1.65
ATG4AQ8WYN0 AC099842.1-201ENST00000619919 596 ntBASIC4.75□□□□□ -1.65
ATG4AQ8WYN0 CR392039.4-201ENST00000624968 501 ntBASIC4.75□□□□□ -1.65
ATG4AQ8WYN0 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
ATG4AQ8WYN0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4AQ8WYN0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4AQ8WYN0 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4AQ8WYN0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
ATG4AQ8WYN0 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AC017104.4-201ENST00000636283 1592 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 RNA5SP88-201ENST00000365560 109 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 RNU6-1119P-201ENST00000384349 108 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 RNU6-1122P-201ENST00000384449 107 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 DEFB108C-201ENST00000400154 252 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 MIR1178-201ENST00000408396 91 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 RPL23AP27-201ENST00000415161 451 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AC093698.1-201ENST00000423843 571 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 NRBF2P3-201ENST00000432731 865 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 LYPLA1P1-201ENST00000434514 622 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 CDC27P1-201ENST00000445384 715 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 NPM1P39-201ENST00000449818 867 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 ISCUP1-201ENST00000454451 448 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 ARPC3P2-201ENST00000457786 533 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AC063943.1-201ENST00000465434 453 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 RPL7AP6-201ENST00000477943 801 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 RNU6-202P-201ENST00000515998 96 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 RNU6-347P-201ENST00000516658 105 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AC239860.2-201ENST00000525886 270 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 HMGN2P6-201ENST00000551091 273 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AC087683.1-201ENST00000591187 441 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AC011487.3-201ENST00000593607 453 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AC008687.2-201ENST00000597865 520 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AC073091.2-201ENST00000603205 907 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AC073648.5-201ENST00000603502 305 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AC103792.1-201ENST00000603591 919 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AL596327.1-201ENST00000603629 213 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AC107304.1-201ENST00000604229 296 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AC239868.4-201ENST00000608318 671 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AC018755.4-201ENST00000619715 454 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AC083843.3-201ENST00000623679 2186 ntBASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.74□□□□□ -1.65
ATG4AQ8WYN0 AC021242.1-201ENST00000507315 2035 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 CR383658.2-201ENST00000547576 1525 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 RN7SKP115-201ENST00000363177 317 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 RNU6-251P-201ENST00000363235 104 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 RNU4-91P-201ENST00000364778 135 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 RNY3P10-201ENST00000384764 102 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 MTCO3P31-201ENST00000405526 789 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AL450338.1-201ENST00000407987 512 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 RNA5SP113-201ENST00000410486 84 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 VDAC1P9-201ENST00000412766 841 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AC007899.1-201ENST00000412776 775 ntBASIC4.73□□□□□ -1.65
ATG4AQ8WYN0 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms