Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RNA5SP146-201ENST00000410743 123 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 MTND2P11-201ENST00000423638 648 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 ISCA1P6-201ENST00000427740 390 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 AC092447.2-201ENST00000435487 669 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 snoU13.23-201ENST00000458863 104 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 RPS3AP50-201ENST00000487064 803 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 AP002404.1-201ENST00000532005 451 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 AC079600.2-201ENST00000550076 130 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 AC024153.1-201ENST00000603103 365 ntBASIC2.18□□□□□ -2.06
CSMD3Q7Z407 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CSMD3Q7Z407 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 AC090971.4-201ENST00000560291 1800 ntBASIC2.17□□□□□ -2.06
CSMD3Q7Z407 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 KATNBL1P2-201ENST00000433311 835 ntBASIC2.17□□□□□ -2.06
CSMD3Q7Z407 RPSAP41-201ENST00000439695 860 ntBASIC2.17□□□□□ -2.06
CSMD3Q7Z407 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 AC017037.1-201ENST00000508460 471 ntBASIC2.17□□□□□ -2.06
CSMD3Q7Z407 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 SNORA71.1-201ENST00000364523 117 ntBASIC2.17□□□□□ -2.06
CSMD3Q7Z407 RNU6-851P-201ENST00000384565 107 ntBASIC2.17□□□□□ -2.06
CSMD3Q7Z407 RNA5SP39-201ENST00000411245 120 ntBASIC2.17□□□□□ -2.06
CSMD3Q7Z407 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 NECAP1P2-201ENST00000455668 727 ntBASIC2.17□□□□□ -2.06
CSMD3Q7Z407 AC005229.2-201ENST00000456995 399 ntBASIC2.17□□□□□ -2.06
CSMD3Q7Z407 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 RNA5SP367-201ENST00000516557 118 ntBASIC2.17□□□□□ -2.06
CSMD3Q7Z407 ELOCP29-201ENST00000588193 334 ntBASIC2.17□□□□□ -2.06
CSMD3Q7Z407 AC022509.4-201ENST00000621404 572 ntBASIC2.17□□□□□ -2.06
CSMD3Q7Z407 MFSD8-233ENST00000641482 4860 ntBASIC2.17□□□□□ -2.06
CSMD3Q7Z407 RALGAPA1P1-201ENST00000443361 6232 ntBASIC2.17□□□□□ -2.06
CSMD3Q7Z407 AL022322.2-201ENST00000624072 20397 ntBASIC2.17□□□□□ -2.06
CSMD3Q7Z407 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 RHOT1P2-201ENST00000366423 333 ntBASIC2.17□□□□□ -2.06
CSMD3Q7Z407 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 RPL21P109-201ENST00000422213 475 ntBASIC2.17□□□□□ -2.06
CSMD3Q7Z407 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 AC099063.2-201ENST00000446360 662 ntBASIC2.17□□□□□ -2.06
CSMD3Q7Z407 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 KPNA2P2-201ENST00000419546 1489 ntBASIC2.17□□□□□ -2.06
CSMD3Q7Z407 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CSMD3Q7Z407 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AC073325.2-201ENST00000339545 159 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 MIR9-1-201ENST00000385198 89 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 NAP1L1P2-201ENST00000414182 1089 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 DPPA2P2-201ENST00000418220 897 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 YWHAEP5-201ENST00000431545 765 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AC133134.1-201ENST00000466800 359 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AC112184.1-201ENST00000505179 312 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AP000873.5-201ENST00000533906 236 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 MIR4435-1-201ENST00000582552 80 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AC138627.1-204ENST00000641894 765 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AL672167.1-206ENST00000356293 943 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 MIR887-201ENST00000401258 79 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AC022018.1-201ENST00000430685 241 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 AC074367.1-201ENST00000438685 1125 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 HMGB3P22-202ENST00000451823 572 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 RPL23AP23-201ENST00000452590 471 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 HCG17-214ENST00000453558 732 ntTSL 5 BASIC2.16□□□□□ -2.06
CSMD3Q7Z407 SNORD109B-201ENST00000458961 67 ntBASIC2.16□□□□□ -2.06
CSMD3Q7Z407 SNORD109A-201ENST00000459128 67 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms