Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AL049610.1-201ENST00000423374 372 ntBASIC2.58□□□□□ -2
SCXQ7RTU7 AC005517.2-201ENST00000424673 553 ntBASIC2.58□□□□□ -2
SCXQ7RTU7 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC2.58□□□□□ -2
SCXQ7RTU7 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.58□□□□□ -2
SCXQ7RTU7 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.58□□□□□ -2
SCXQ7RTU7 AL451062.2-201ENST00000427515 271 ntBASIC2.58□□□□□ -2
SCXQ7RTU7 ZNF965P-201ENST00000432501 817 ntBASIC2.58□□□□□ -2
SCXQ7RTU7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC2.58□□□□□ -2
SCXQ7RTU7 ARL4AP4-201ENST00000434170 518 ntBASIC2.58□□□□□ -2
SCXQ7RTU7 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC2.58□□□□□ -2
SCXQ7RTU7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.58□□□□□ -2
SCXQ7RTU7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC2.58□□□□□ -2
SCXQ7RTU7 RSL24D1P2-201ENST00000445584 366 ntBASIC2.58□□□□□ -2
SCXQ7RTU7 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.58□□□□□ -2
SCXQ7RTU7 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.58□□□□□ -2
SCXQ7RTU7 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.58□□□□□ -2
SCXQ7RTU7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC2.58□□□□□ -2
SCXQ7RTU7 VN1R17P-201ENST00000472048 1090 ntBASIC2.58□□□□□ -2
SCXQ7RTU7 AL035404.1-201ENST00000497982 568 ntBASIC2.58□□□□□ -2
SCXQ7RTU7 BNIP3P41-201ENST00000503774 571 ntBASIC2.58□□□□□ -2
SCXQ7RTU7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.58□□□□□ -2
SCXQ7RTU7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.58□□□□□ -2
SCXQ7RTU7 RNU6-751P-201ENST00000516382 101 ntBASIC2.58□□□□□ -2
SCXQ7RTU7 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC2.58□□□□□ -2
SCXQ7RTU7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.58□□□□□ -2
SCXQ7RTU7 AC139103.1-201ENST00000534696 1030 ntBASIC2.58□□□□□ -2
SCXQ7RTU7 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC2.58□□□□□ -2
SCXQ7RTU7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.58□□□□□ -2
SCXQ7RTU7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.58□□□□□ -2
SCXQ7RTU7 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.58□□□□□ -2
SCXQ7RTU7 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC2.58□□□□□ -2
SCXQ7RTU7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.58□□□□□ -2
SCXQ7RTU7 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.58□□□□□ -2
SCXQ7RTU7 AC018618.2-201ENST00000604770 446 ntBASIC2.58□□□□□ -2
SCXQ7RTU7 AC138907.10-201ENST00000623708 983 ntBASIC2.58□□□□□ -2
SCXQ7RTU7 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.58□□□□□ -2
SCXQ7RTU7 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC2.58□□□□□ -2
SCXQ7RTU7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SCXQ7RTU7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
SCXQ7RTU7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
SCXQ7RTU7 NCAPGP1-201ENST00000505112 1814 ntBASIC2.58□□□□□ -2
SCXQ7RTU7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC2.58□□□□□ -2
SCXQ7RTU7 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
SCXQ7RTU7 AC011978.2-201ENST00000569835 2054 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SCXQ7RTU7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC2.57□□□□□ -2
SCXQ7RTU7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
SCXQ7RTU7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC2.57□□□□□ -2
SCXQ7RTU7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SCXQ7RTU7 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.57□□□□□ -2
SCXQ7RTU7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SCXQ7RTU7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC2.57□□□□□ -2
SCXQ7RTU7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.57□□□□□ -2
SCXQ7RTU7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SCXQ7RTU7 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 SNORD35B-201ENST00000363660 87 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 SNORA51.2-201ENST00000364595 132 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 SNORD51.1-201ENST00000365405 77 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 MIR142-201ENST00000384835 87 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
SCXQ7RTU7 AL590704.1-201ENST00000402856 794 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 PRRC2CP1-201ENST00000404428 159 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 AL138880.1-201ENST00000405824 642 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 RNU2-17P-201ENST00000410290 190 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.57□□□□□ -2
SCXQ7RTU7 RPL31P2-201ENST00000413849 377 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 VTA1P1-201ENST00000414044 866 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.57□□□□□ -2
SCXQ7RTU7 USP12PY-201ENST00000427677 1064 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.57□□□□□ -2
SCXQ7RTU7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.57□□□□□ -2
SCXQ7RTU7 AL035246.1-201ENST00000433554 1255 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.57□□□□□ -2
SCXQ7RTU7 HMGB1P12-201ENST00000438594 598 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.57□□□□□ -2
SCXQ7RTU7 AC114878.1-201ENST00000441166 358 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 VN1R34P-201ENST00000447387 883 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 MTND5P8-201ENST00000449817 1083 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.57□□□□□ -2
SCXQ7RTU7 AC007688.1-201ENST00000475592 759 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 RPS4XP15-201ENST00000489210 795 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
SCXQ7RTU7 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.57□□□□□ -2
SCXQ7RTU7 AC005798.1-201ENST00000513715 387 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.57□□□□□ -2
SCXQ7RTU7 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.57□□□□□ -2
SCXQ7RTU7 AC104115.2-201ENST00000523026 687 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.57□□□□□ -2
SCXQ7RTU7 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.57□□□□□ -2
SCXQ7RTU7 AP003717.3-201ENST00000544832 1180 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
SCXQ7RTU7 AC063950.1-201ENST00000552036 308 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.57□□□□□ -2
SCXQ7RTU7 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.57□□□□□ -2
SCXQ7RTU7 AC010735.1-201ENST00000567305 1026 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC2.57□□□□□ -2
SCXQ7RTU7 AC099489.2-201ENST00000574976 260 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 AC025627.2-201ENST00000576220 160 ntBASIC2.57□□□□□ -2
SCXQ7RTU7 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.57□□□□□ -2
SCXQ7RTU7 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms