Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.85□□□□□ -1.79
NHLRC1Q6VVB1 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.85□□□□□ -1.79
NHLRC1Q6VVB1 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.85□□□□□ -1.79
NHLRC1Q6VVB1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NHLRC1Q6VVB1 AL445984.1-201ENST00000637834 659 ntBASIC3.85□□□□□ -1.79
NHLRC1Q6VVB1 AC008013.2-202ENST00000637965 364 ntBASIC3.85□□□□□ -1.79
NHLRC1Q6VVB1 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.85□□□□□ -1.79
NHLRC1Q6VVB1 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.85□□□□□ -1.79
NHLRC1Q6VVB1 AC139713.2-214ENST00000642059 1811 ntBASIC3.85□□□□□ -1.79
NHLRC1Q6VVB1 AC005261.4-201ENST00000600047 1385 ntBASIC3.85□□□□□ -1.79
NHLRC1Q6VVB1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NHLRC1Q6VVB1 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NHLRC1Q6VVB1 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NHLRC1Q6VVB1 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NHLRC1Q6VVB1 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 RNA5SP502-201ENST00000362694 119 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 RNA5SP447-201ENST00000363749 119 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 RNU6-374P-201ENST00000364146 108 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 RNA5SP175-201ENST00000364275 119 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 RNU6-925P-201ENST00000384629 104 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 NRBF2P2-201ENST00000413087 861 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 Z93242.1-201ENST00000427102 353 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 AC005345.1-201ENST00000431868 217 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 RPL21P112-201ENST00000434403 463 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 AL356276.2-201ENST00000435919 558 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 USP9YP22-201ENST00000438971 294 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 AL358794.1-201ENST00000445689 381 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 TVP23BP2-201ENST00000455082 615 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 RPS20P32-201ENST00000456044 356 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 AP000873.1-201ENST00000463987 400 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 AC078817.1-201ENST00000492623 435 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 BNIP3P41-201ENST00000503774 571 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 AC006064.5-201ENST00000541782 248 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 AC092747.2-201ENST00000545069 983 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 SULT1C2P1-202ENST00000562418 459 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 AC122134.1-202ENST00000569111 1201 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 AC012182.1-201ENST00000570133 895 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 MIR4697-201ENST00000582977 78 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 MIR5096-201ENST00000583713 70 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 AC068790.5-201ENST00000602741 355 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 AC022306.3-201ENST00000619930 550 ntBASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
NHLRC1Q6VVB1 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
NHLRC1Q6VVB1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
NHLRC1Q6VVB1 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
NHLRC1Q6VVB1 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
NHLRC1Q6VVB1 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
NHLRC1Q6VVB1 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
NHLRC1Q6VVB1 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
NHLRC1Q6VVB1 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 AL603766.1-201ENST00000407763 664 ntBASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 OR8G2P-201ENST00000412796 908 ntBASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 Z75741.2-201ENST00000417272 1167 ntBASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 AL354692.1-201ENST00000423044 315 ntBASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 AL512326.1-201ENST00000443050 721 ntBASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 AC133473.1-201ENST00000455173 299 ntBASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 RPL23AP81-201ENST00000455252 467 ntBASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 snoU109.3-201ENST00000459477 145 ntBASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 TMED11P-201ENST00000479478 690 ntBASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 RPL21P131-201ENST00000497298 483 ntBASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 AC005921.1-201ENST00000510589 286 ntBASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 MTCO1P30-201ENST00000515244 580 ntBASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 RAB9BP1-201ENST00000519581 626 ntBASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 TOMM20P2-201ENST00000540082 421 ntBASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.83□□□□□ -1.8
NHLRC1Q6VVB1 AL356218.2-201ENST00000605264 187 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms