Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.5□□□□□ -1.85
H3F3CQ6NXT2 AL354760.1-201ENST00000608357 643 ntBASIC3.5□□□□□ -1.85
H3F3CQ6NXT2 AC128687.2-201ENST00000609657 566 ntBASIC3.5□□□□□ -1.85
H3F3CQ6NXT2 MIR4278-201ENST00000636094 69 ntBASIC3.5□□□□□ -1.85
H3F3CQ6NXT2 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.5□□□□□ -1.85
H3F3CQ6NXT2 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
H3F3CQ6NXT2 USP8P1-201ENST00000494673 3183 ntBASIC3.5□□□□□ -1.85
H3F3CQ6NXT2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
H3F3CQ6NXT2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
H3F3CQ6NXT2 IPO8P1-201ENST00000455509 3109 ntBASIC3.5□□□□□ -1.85
H3F3CQ6NXT2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 RNA5SP189-201ENST00000364920 115 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 OR52E6-202ENST00000379946 954 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 AL589655.1-201ENST00000405398 482 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 RNU2-37P-201ENST00000410695 177 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 AC087650.1-201ENST00000431445 468 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 AC097499.1-201ENST00000444277 208 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 SETD6P1-201ENST00000444575 317 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 HMGB1P48-201ENST00000446155 598 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 AC078918.1-201ENST00000498515 228 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 AC006499.5-201ENST00000505037 514 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 AC005921.1-201ENST00000510589 286 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 AC021146.1-201ENST00000511202 716 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 USP9YP5-201ENST00000511770 630 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 RN7SKP157-201ENST00000516174 282 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 RNU6-751P-201ENST00000516382 101 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 SNORA31.13-201ENST00000516624 135 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 AC022784.5-201ENST00000522241 437 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 HAUS1P3-201ENST00000523909 662 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 MTND2P26-201ENST00000528255 1029 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 CBX3P2-202ENST00000583365 535 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 AC012531.5-201ENST00000611375 151 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 DDX6P1-205ENST00000441966 1436 ntBASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
H3F3CQ6NXT2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 AF127577.6-201ENST00000623352 2191 ntBASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 SNORD6-201ENST00000365444 73 ntBASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 RNU6-1293P-201ENST00000384077 107 ntBASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 AC244453.4-201ENST00000419150 388 ntBASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 AL035423.1-201ENST00000420331 213 ntBASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 AC096638.2-201ENST00000434965 711 ntBASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 AC006480.1-201ENST00000449887 378 ntBASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 TRBV8-2-201ENST00000475637 270 ntBASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 AC084198.1-201ENST00000477747 402 ntBASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 AP003717.3-201ENST00000544832 1180 ntBASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 CCNG2P1-201ENST00000549521 1000 ntBASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 AL137849.1-201ENST00000604767 169 ntBASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 AC103710.3-201ENST00000608157 948 ntBASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 RNU6-156P-201ENST00000621869 107 ntBASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.48□□□□□ -1.85
H3F3CQ6NXT2 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
H3F3CQ6NXT2 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
H3F3CQ6NXT2 SEPT7P7-201ENST00000420492 1301 ntBASIC3.47□□□□□ -1.85
H3F3CQ6NXT2 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.47□□□□□ -1.85
H3F3CQ6NXT2 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
H3F3CQ6NXT2 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
H3F3CQ6NXT2 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms