Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 WBP11P1-201ENST00000562560 1931 ntBASIC7.19□□□□□ -1.26
RC3H1Q5TC82 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RC3H1Q5TC82 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 MTND5P10-201ENST00000603719 1809 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AC112255.1-201ENST00000624070 2493 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 RNU6-1032P-201ENST00000384100 107 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 Y_RNA.489-201ENST00000384410 101 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 MIR130A-201ENST00000385274 89 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 RNA5SP339-201ENST00000390987 122 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 MIR548M-201ENST00000408260 86 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AL807761.1-201ENST00000417622 171 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AC108075.1-201ENST00000424692 529 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AL669831.1-202ENST00000428504 417 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AC096644.2-201ENST00000429278 159 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AL035666.1-201ENST00000446195 348 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AC108161.1-201ENST00000461060 402 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 RPS23P2-201ENST00000463671 415 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 RPL7P22-201ENST00000466005 733 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 BX284632.1-201ENST00000478218 541 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 RN7SL447P-201ENST00000494711 245 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AC098591.2-201ENST00000510152 315 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 RNU6-1334P-201ENST00000516032 105 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AL049779.3-201ENST00000557141 606 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 MIR3691-201ENST00000578066 90 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AC067852.5-201ENST00000589299 310 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 CDC42EP3P1-201ENST00000601004 764 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 PRR13P7-201ENST00000605538 430 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 FAM157A-202ENST00000615155 405 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AC025574.2-201ENST00000615621 514 ntBASIC7.18□□□□□ -1.26
RC3H1Q5TC82 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RC3H1Q5TC82 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 RNU5E-1-201ENST00000362477 120 ntBASIC7.17□□□□□ -1.26
RC3H1Q5TC82 RNU1-106P-201ENST00000384382 164 ntBASIC7.17□□□□□ -1.26
RC3H1Q5TC82 SNORA19-201ENST00000384737 128 ntBASIC7.17□□□□□ -1.26
RC3H1Q5TC82 MIR506-201ENST00000384998 124 ntBASIC7.17□□□□□ -1.26
RC3H1Q5TC82 MIR551A-201ENST00000385042 96 ntBASIC7.17□□□□□ -1.26
RC3H1Q5TC82 RPL7P25-201ENST00000404151 721 ntBASIC7.17□□□□□ -1.26
RC3H1Q5TC82 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 RNU6-370P-201ENST00000411008 104 ntBASIC7.17□□□□□ -1.26
RC3H1Q5TC82 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 ERLEC1P1-201ENST00000433806 578 ntBASIC7.17□□□□□ -1.26
RC3H1Q5TC82 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 AL389915.2-201ENST00000454576 441 ntBASIC7.17□□□□□ -1.26
RC3H1Q5TC82 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 AL035690.1-201ENST00000490892 383 ntBASIC7.17□□□□□ -1.26
RC3H1Q5TC82 RPS26P24-201ENST00000497656 331 ntBASIC7.17□□□□□ -1.26
RC3H1Q5TC82 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 RANP9-201ENST00000519957 271 ntBASIC7.17□□□□□ -1.26
RC3H1Q5TC82 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC7.17□□□□□ -1.26
RC3H1Q5TC82 AC011468.4-201ENST00000603942 409 ntBASIC7.17□□□□□ -1.26
RC3H1Q5TC82 AC018462.2-201ENST00000605375 395 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms