Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 PNRC2P1-201ENST00000423940 420 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 USP9YP31-201ENST00000431405 881 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.41□□□□□ -1.86
RFX4Q33E94 RPL17P35-201ENST00000432217 549 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 PTP4A1P3-201ENST00000433661 420 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.41□□□□□ -1.86
RFX4Q33E94 AL031663.1-201ENST00000437445 219 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 ARL5AP2-201ENST00000444698 533 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 AC026979.1-201ENST00000492525 396 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 RPL5P23-201ENST00000496040 868 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.41□□□□□ -1.86
RFX4Q33E94 MTND3P24-201ENST00000506306 329 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
RFX4Q33E94 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.41□□□□□ -1.86
RFX4Q33E94 AC133963.2-201ENST00000513686 578 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 RN7SKP122-201ENST00000515923 296 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.41□□□□□ -1.86
RFX4Q33E94 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.41□□□□□ -1.86
RFX4Q33E94 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.41□□□□□ -1.86
RFX4Q33E94 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.41□□□□□ -1.86
RFX4Q33E94 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.41□□□□□ -1.86
RFX4Q33E94 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.41□□□□□ -1.86
RFX4Q33E94 AL591034.3-201ENST00000605511 685 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.41□□□□□ -1.86
RFX4Q33E94 AC245389.2-201ENST00000616023 576 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 AC006338.2-201ENST00000616864 791 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 AC242843.1-201ENST00000618702 573 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 AL445493.3-201ENST00000619568 477 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 MIR6758-201ENST00000620653 63 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RFX4Q33E94 CR392039.4-201ENST00000624968 501 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 AF001550.2-201ENST00000636643 217 ntBASIC3.41□□□□□ -1.86
RFX4Q33E94 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.41□□□□□ -1.86
RFX4Q33E94 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.41□□□□□ -1.86
RFX4Q33E94 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RFX4Q33E94 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RFX4Q33E94 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RFX4Q33E94 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.4□□□□□ -1.86
RFX4Q33E94 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RFX4Q33E94 AL121657.1-201ENST00000327215 531 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
RFX4Q33E94 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RFX4Q33E94 ZNF602P-201ENST00000405929 924 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 HMGB1P13-201ENST00000406019 642 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 RPL21P65-201ENST00000406094 466 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 AC069218.2-201ENST00000411665 344 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.4□□□□□ -1.87
RFX4Q33E94 RPS24P8-201ENST00000431490 402 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 AL512661.1-201ENST00000434586 1253 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.4□□□□□ -1.87
RFX4Q33E94 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.4□□□□□ -1.87
RFX4Q33E94 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.4□□□□□ -1.87
RFX4Q33E94 AC074367.1-201ENST00000438685 1125 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 RPS27P5-201ENST00000444247 244 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 RPS3AP46-201ENST00000448352 682 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 RPL23AP62-201ENST00000463396 453 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 RPS7P7-201ENST00000463499 571 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 TRBV8-2-201ENST00000475637 270 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.4□□□□□ -1.87
RFX4Q33E94 RPS4XP15-201ENST00000489210 795 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.4□□□□□ -1.87
RFX4Q33E94 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.4□□□□□ -1.87
RFX4Q33E94 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.4□□□□□ -1.87
RFX4Q33E94 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.4□□□□□ -1.87
RFX4Q33E94 RNU2-27P-201ENST00000516185 142 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 RNU6-579P-201ENST00000516879 102 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 NDUFB9P3-201ENST00000521269 501 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.4□□□□□ -1.87
RFX4Q33E94 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.4□□□□□ -1.87
RFX4Q33E94 OR5AK3P-201ENST00000527486 1297 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
RFX4Q33E94 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.4□□□□□ -1.87
RFX4Q33E94 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RFX4Q33E94 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.4□□□□□ -1.87
RFX4Q33E94 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.4□□□□□ -1.87
RFX4Q33E94 AC115085.1-201ENST00000588924 229 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.4□□□□□ -1.87
RFX4Q33E94 LLPHP1-201ENST00000603571 367 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 AC079880.2-201ENST00000603790 1213 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 AC018618.2-201ENST00000604770 446 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.4□□□□□ -1.87
RFX4Q33E94 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.4□□□□□ -1.87
RFX4Q33E94 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.4□□□□□ -1.87
RFX4Q33E94 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.4□□□□□ -1.87
RFX4Q33E94 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
RFX4Q33E94 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RFX4Q33E94 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RFX4Q33E94 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RFX4Q33E94 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
RFX4Q33E94 ZNF826P-207ENST00000622273 1910 ntBASIC3.4□□□□□ -1.87
RFX4Q33E94 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RFX4Q33E94 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.4□□□□□ -1.87
RFX4Q33E94 AL133383.2-201ENST00000622958 2336 ntBASIC3.39□□□□□ -1.87
RFX4Q33E94 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RFX4Q33E94 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms