Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.03□□□□□ -1.92
FOXF1Q12946 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 RN7SKP116-201ENST00000516902 319 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 NPM1P35-201ENST00000533043 868 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 AC011602.1-201ENST00000546484 331 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 AC011611.1-201ENST00000552179 197 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 AC092868.3-201ENST00000560515 784 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 AL845331.3-202ENST00000562856 261 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 AC018552.3-201ENST00000567416 561 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 AC015917.1-201ENST00000579654 510 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.03□□□□□ -1.92
FOXF1Q12946 AC243654.2-201ENST00000612843 443 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 AL713922.2-201ENST00000619384 716 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.03□□□□□ -1.92
FOXF1Q12946 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
FOXF1Q12946 ZNF826P-207ENST00000622273 1910 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
FOXF1Q12946 CR383658.2-201ENST00000547576 1525 ntBASIC3.03□□□□□ -1.92
FOXF1Q12946 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
FOXF1Q12946 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
FOXF1Q12946 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.02□□□□□ -1.93
FOXF1Q12946 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
FOXF1Q12946 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
FOXF1Q12946 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
FOXF1Q12946 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
FOXF1Q12946 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.02□□□□□ -1.93
FOXF1Q12946 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
FOXF1Q12946 RNU6-146P-201ENST00000384602 108 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
FOXF1Q12946 RNU6-55P-201ENST00000411092 107 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 RNU6-954P-201ENST00000411355 107 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.02□□□□□ -1.93
FOXF1Q12946 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.02□□□□□ -1.93
FOXF1Q12946 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.02□□□□□ -1.93
FOXF1Q12946 RPF2P1-201ENST00000424137 906 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.02□□□□□ -1.93
FOXF1Q12946 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 AC097713.2-201ENST00000430199 356 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 AC092013.1-201ENST00000438795 332 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 ELOCP10-201ENST00000440624 327 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.02□□□□□ -1.93
FOXF1Q12946 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.02□□□□□ -1.93
FOXF1Q12946 PRSS3P4-201ENST00000453323 162 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.02□□□□□ -1.93
FOXF1Q12946 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.02□□□□□ -1.93
FOXF1Q12946 AP000926.3-201ENST00000497201 299 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
FOXF1Q12946 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
FOXF1Q12946 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.02□□□□□ -1.93
FOXF1Q12946 NDUFB4P9-201ENST00000511646 388 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 RNU6-319P-201ENST00000516025 108 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 SNORD116-30-201ENST00000516468 85 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 NCAPGP2-201ENST00000557911 754 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.02□□□□□ -1.93
FOXF1Q12946 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.02□□□□□ -1.93
FOXF1Q12946 AC011492.1-201ENST00000600023 315 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.02□□□□□ -1.93
FOXF1Q12946 ELOCP34-201ENST00000604436 327 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 AL162713.1-201ENST00000604480 262 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.02□□□□□ -1.93
FOXF1Q12946 AL392048.1-201ENST00000613946 534 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.02□□□□□ -1.93
FOXF1Q12946 AC009452.1-201ENST00000640823 606 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
FOXF1Q12946 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.02□□□□□ -1.93
FOXF1Q12946 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
FOXF1Q12946 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.01□□□□□ -1.93
FOXF1Q12946 RNU1-70P-201ENST00000362618 164 ntBASIC3.01□□□□□ -1.93
FOXF1Q12946 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
FOXF1Q12946 MTCO3P31-201ENST00000405526 789 ntBASIC3.01□□□□□ -1.93
FOXF1Q12946 RANP4-201ENST00000413361 655 ntBASIC3.01□□□□□ -1.93
FOXF1Q12946 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
FOXF1Q12946 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
FOXF1Q12946 RPS7P13-201ENST00000413955 498 ntBASIC3.01□□□□□ -1.93
FOXF1Q12946 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.01□□□□□ -1.93
FOXF1Q12946 PLGLA-201ENST00000465668 449 ntBASIC3.01□□□□□ -1.93
FOXF1Q12946 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXF1Q12946 AC021205.2-201ENST00000480069 347 ntBASIC3.01□□□□□ -1.93
FOXF1Q12946 RPL21P13-201ENST00000488305 481 ntBASIC3.01□□□□□ -1.93
FOXF1Q12946 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.01□□□□□ -1.93
FOXF1Q12946 WBP1LP4-201ENST00000505043 344 ntBASIC3.01□□□□□ -1.93
FOXF1Q12946 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXF1Q12946 CCNHP1-201ENST00000513311 678 ntBASIC3.01□□□□□ -1.93
FOXF1Q12946 AP001636.2-201ENST00000525517 696 ntBASIC3.01□□□□□ -1.93
FOXF1Q12946 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.01□□□□□ -1.93
FOXF1Q12946 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.01□□□□□ -1.93
FOXF1Q12946 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.01□□□□□ -1.93
FOXF1Q12946 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXF1Q12946 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXF1Q12946 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXF1Q12946 AC053481.3-201ENST00000577881 843 ntBASIC3.01□□□□□ -1.93
FOXF1Q12946 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXF1Q12946 AC103710.3-201ENST00000608157 948 ntBASIC3.01□□□□□ -1.93
FOXF1Q12946 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXF1Q12946 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.01□□□□□ -1.93
FOXF1Q12946 AC084757.4-201ENST00000616350 526 ntBASIC3.01□□□□□ -1.93
FOXF1Q12946 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.01□□□□□ -1.93
FOXF1Q12946 MIR7975-201ENST00000619350 68 ntBASIC3.01□□□□□ -1.93
FOXF1Q12946 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms