Protein–RNA interactions for Protein: Q09161

NCBP1, Nuclear cap-binding protein subunit 1, humanhuman

Known RBP Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1Q09161 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NCBP1Q09161 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NCBP1Q09161 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NCBP1Q09161 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NCBP1Q09161 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.11□□□□□ -1.75
NCBP1Q09161 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.11□□□□□ -1.75
NCBP1Q09161 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NCBP1Q09161 SNORA5A-201ENST00000384111 134 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 RNU4-31P-201ENST00000384211 141 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 AL389915.1-201ENST00000422463 466 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 OR4F13P-201ENST00000428478 931 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 USP9YP7-201ENST00000436723 430 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.11□□□□□ -1.75
NCBP1Q09161 AC114878.1-201ENST00000441166 358 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 USP9YP32-201ENST00000452432 430 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 RPL6P9-201ENST00000466502 859 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 RPL30P11-201ENST00000495304 339 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.11□□□□□ -1.75
NCBP1Q09161 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.11□□□□□ -1.75
NCBP1Q09161 NDUFB4P9-201ENST00000511646 388 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.11□□□□□ -1.75
NCBP1Q09161 RN7SKP157-201ENST00000516174 282 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 AL121594.4-201ENST00000556211 1196 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 MTND4LP24-201ENST00000572277 291 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 MIR5047-201ENST00000579212 100 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 MIR4444-1-201ENST00000581696 74 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 MIR4444-2-201ENST00000584390 74 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NCBP1Q09161 SNORA62.6-201ENST00000606322 83 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 AL450489.1-201ENST00000612071 468 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NCBP1Q09161 AC104820.1-201ENST00000624183 307 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 AC009452.1-201ENST00000640823 606 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NCBP1Q09161 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NCBP1Q09161 GTF2H2B-203ENST00000508065 1432 ntBASIC4.11□□□□□ -1.75
NCBP1Q09161 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.11□□□□□ -1.75
NCBP1Q09161 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NCBP1Q09161 MIR7-3-201ENST00000384898 110 ntBASIC4.1□□□□□ -1.75
NCBP1Q09161 RNU2-65P-201ENST00000410162 185 ntBASIC4.1□□□□□ -1.75
NCBP1Q09161 RPS15AP6-201ENST00000420703 385 ntBASIC4.1□□□□□ -1.75
NCBP1Q09161 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NCBP1Q09161 HIGD1AP12-201ENST00000427832 281 ntBASIC4.1□□□□□ -1.75
NCBP1Q09161 TPTE2P6-202ENST00000445572 1007 ntBASIC4.1□□□□□ -1.75
NCBP1Q09161 RPS3AP46-201ENST00000448352 682 ntBASIC4.1□□□□□ -1.75
NCBP1Q09161 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.1□□□□□ -1.75
NCBP1Q09161 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.1□□□□□ -1.75
NCBP1Q09161 AC010401.1-201ENST00000463867 348 ntBASIC4.1□□□□□ -1.75
NCBP1Q09161 FCF1P3-201ENST00000496394 590 ntBASIC4.1□□□□□ -1.75
NCBP1Q09161 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.1□□□□□ -1.75
NCBP1Q09161 AC010285.3-201ENST00000511668 676 ntBASIC4.1□□□□□ -1.75
NCBP1Q09161 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.1□□□□□ -1.75
NCBP1Q09161 RNA5SP309-201ENST00000516670 106 ntBASIC4.1□□□□□ -1.75
NCBP1Q09161 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.1□□□□□ -1.75
NCBP1Q09161 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NCBP1Q09161 AP002812.4-201ENST00000532139 286 ntBASIC4.1□□□□□ -1.75
NCBP1Q09161 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.1□□□□□ -1.75
NCBP1Q09161 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.1□□□□□ -1.75
NCBP1Q09161 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.1□□□□□ -1.75
NCBP1Q09161 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.1□□□□□ -1.75
NCBP1Q09161 AC069304.3-201ENST00000603938 1084 ntBASIC4.1□□□□□ -1.75
NCBP1Q09161 SUMO2P14-201ENST00000604488 293 ntBASIC4.1□□□□□ -1.75
NCBP1Q09161 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NCBP1Q09161 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NCBP1Q09161 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NCBP1Q09161 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.1□□□□□ -1.75
NCBP1Q09161 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NCBP1Q09161 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
NCBP1Q09161 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
NCBP1Q09161 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NCBP1Q09161 AC090229.1-201ENST00000590983 1609 ntBASIC4.1□□□□□ -1.75
NCBP1Q09161 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
NCBP1Q09161 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
NCBP1Q09161 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NCBP1Q09161 AC058791.1-201ENST00000608412 3198 ntBASIC4.09□□□□□ -1.75
NCBP1Q09161 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NCBP1Q09161 RNA5SP124-201ENST00000362739 110 ntBASIC4.09□□□□□ -1.75
NCBP1Q09161 AL136116.1-201ENST00000403591 381 ntBASIC4.09□□□□□ -1.75
NCBP1Q09161 RNU4-74P-201ENST00000411280 161 ntBASIC4.09□□□□□ -1.75
NCBP1Q09161 RPS7P13-201ENST00000413955 498 ntBASIC4.09□□□□□ -1.75
NCBP1Q09161 AL590623.1-201ENST00000427864 105 ntBASIC4.09□□□□□ -1.75
NCBP1Q09161 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.09□□□□□ -1.75
NCBP1Q09161 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NCBP1Q09161 PDSS1P2-201ENST00000449397 678 ntBASIC4.09□□□□□ -1.75
NCBP1Q09161 MTND3P4-201ENST00000453537 303 ntBASIC4.09□□□□□ -1.75
NCBP1Q09161 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.09□□□□□ -1.75
NCBP1Q09161 SNORD105B-201ENST00000458770 79 ntBASIC4.09□□□□□ -1.75
NCBP1Q09161 AC087385.1-201ENST00000475062 312 ntBASIC4.09□□□□□ -1.75
NCBP1Q09161 AC084198.1-201ENST00000477747 402 ntBASIC4.09□□□□□ -1.75
NCBP1Q09161 NPM1P17-201ENST00000479221 602 ntBASIC4.09□□□□□ -1.75
NCBP1Q09161 MTATP6P22-201ENST00000507369 598 ntBASIC4.09□□□□□ -1.75
NCBP1Q09161 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.09□□□□□ -1.75
NCBP1Q09161 SNORA48.9-201ENST00000516419 162 ntBASIC4.09□□□□□ -1.75
NCBP1Q09161 AC026403.1-201ENST00000518938 295 ntBASIC4.09□□□□□ -1.75
NCBP1Q09161 AL161713.1-201ENST00000555538 145 ntBASIC4.09□□□□□ -1.75
NCBP1Q09161 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NCBP1Q09161 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NCBP1Q09161 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.09□□□□□ -1.75
NCBP1Q09161 AC009501.3-201ENST00000605001 1352 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms