Protein–RNA interactions for Protein: Q02880

TOP2B, DNA topoisomerase 2-beta, humanhuman

Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2BQ02880 HMGB1P50-201ENST00000605814 607 ntBASIC5.26□□□□□ -1.57
TOP2BQ02880 AC093849.1-201ENST00000563631 2209 ntBASIC5.26□□□□□ -1.57
TOP2BQ02880 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TOP2BQ02880 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TOP2BQ02880 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TOP2BQ02880 AL132656.3-201ENST00000606384 1595 ntBASIC5.25□□□□□ -1.57
TOP2BQ02880 AL451142.2-201ENST00000429076 2090 ntBASIC5.25□□□□□ -1.57
TOP2BQ02880 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TOP2BQ02880 AL133477.1-201ENST00000457472 514 ntBASIC5.25□□□□□ -1.57
TOP2BQ02880 RPS4XP13-201ENST00000483219 789 ntBASIC5.25□□□□□ -1.57
TOP2BQ02880 AC090543.2-201ENST00000483963 348 ntBASIC5.25□□□□□ -1.57
TOP2BQ02880 AC012123.2-201ENST00000485809 248 ntBASIC5.25□□□□□ -1.57
TOP2BQ02880 PRELID3BP8-201ENST00000604148 295 ntBASIC5.25□□□□□ -1.57
TOP2BQ02880 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.25□□□□□ -1.57
TOP2BQ02880 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
TOP2BQ02880 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TOP2BQ02880 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.24□□□□□ -1.57
TOP2BQ02880 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
TOP2BQ02880 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.24□□□□□ -1.57
TOP2BQ02880 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.24□□□□□ -1.57
TOP2BQ02880 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.24□□□□□ -1.57
TOP2BQ02880 VN1R104P-201ENST00000505115 1009 ntBASIC5.24□□□□□ -1.57
TOP2BQ02880 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.24□□□□□ -1.57
TOP2BQ02880 NARSP2-201ENST00000518524 679 ntBASIC5.24□□□□□ -1.57
TOP2BQ02880 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.24□□□□□ -1.57
TOP2BQ02880 MIR4524B-201ENST00000581569 115 ntBASIC5.24□□□□□ -1.57
TOP2BQ02880 AC067852.4-201ENST00000590314 478 ntBASIC5.24□□□□□ -1.57
TOP2BQ02880 AC099506.2-201ENST00000623074 221 ntBASIC5.24□□□□□ -1.57
TOP2BQ02880 AP003485.2-201ENST00000623636 610 ntBASIC5.24□□□□□ -1.57
TOP2BQ02880 FAM35DP-201ENST00000323387 2712 ntBASIC5.24□□□□□ -1.57
TOP2BQ02880 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TOP2BQ02880 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.23□□□□□ -1.57
TOP2BQ02880 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
TOP2BQ02880 RPL37P4-201ENST00000448908 268 ntBASIC5.23□□□□□ -1.57
TOP2BQ02880 MTCO3P20-201ENST00000454926 688 ntBASIC5.23□□□□□ -1.57
TOP2BQ02880 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.23□□□□□ -1.57
TOP2BQ02880 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TOP2BQ02880 GTF3AP2-201ENST00000557014 266 ntBASIC5.23□□□□□ -1.57
TOP2BQ02880 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.23□□□□□ -1.57
TOP2BQ02880 AL034351.1-201ENST00000605288 668 ntBASIC5.23□□□□□ -1.57
TOP2BQ02880 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC5.23□□□□□ -1.57
TOP2BQ02880 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TOP2BQ02880 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TOP2BQ02880 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.23□□□□□ -1.57
TOP2BQ02880 SNORA71.1-201ENST00000364523 117 ntBASIC5.23□□□□□ -1.57
TOP2BQ02880 Y_RNA.676-201ENST00000516393 96 ntBASIC5.23□□□□□ -1.57
TOP2BQ02880 H3F3AP1-201ENST00000559984 334 ntBASIC5.23□□□□□ -1.57
TOP2BQ02880 MIR4435-1-201ENST00000582552 80 ntBASIC5.23□□□□□ -1.57
TOP2BQ02880 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TOP2BQ02880 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TOP2BQ02880 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC5.22□□□□□ -1.57
TOP2BQ02880 AC108206.1-201ENST00000570186 4159 ntBASIC5.22□□□□□ -1.57
TOP2BQ02880 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TOP2BQ02880 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TOP2BQ02880 MIR30E-201ENST00000362104 92 ntBASIC5.22□□□□□ -1.57
TOP2BQ02880 RNU4-82P-201ENST00000362443 140 ntBASIC5.22□□□□□ -1.57
TOP2BQ02880 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TOP2BQ02880 AP002088.1-201ENST00000382740 395 ntBASIC5.22□□□□□ -1.57
TOP2BQ02880 ZNF603P-201ENST00000405613 487 ntBASIC5.22□□□□□ -1.57
TOP2BQ02880 AL513124.1-201ENST00000450410 614 ntBASIC5.22□□□□□ -1.57
TOP2BQ02880 AP000942.1-201ENST00000463969 747 ntBASIC5.22□□□□□ -1.57
TOP2BQ02880 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.22□□□□□ -1.57
TOP2BQ02880 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.22□□□□□ -1.57
TOP2BQ02880 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.22□□□□□ -1.57
TOP2BQ02880 VN1R78P-201ENST00000597393 564 ntBASIC5.22□□□□□ -1.57
TOP2BQ02880 RPL23AP92-201ENST00000603609 255 ntBASIC5.22□□□□□ -1.57
TOP2BQ02880 AC010149.2-201ENST00000637608 315 ntBASIC5.22□□□□□ -1.57
TOP2BQ02880 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TOP2BQ02880 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TOP2BQ02880 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC5.21□□□□□ -1.58
TOP2BQ02880 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.21□□□□□ -1.58
TOP2BQ02880 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.21□□□□□ -1.58
TOP2BQ02880 RPS12P18-201ENST00000442381 270 ntBASIC5.21□□□□□ -1.58
TOP2BQ02880 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.21□□□□□ -1.58
TOP2BQ02880 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.21□□□□□ -1.58
TOP2BQ02880 AC018552.3-201ENST00000567416 561 ntBASIC5.21□□□□□ -1.58
TOP2BQ02880 DPRXP4-201ENST00000578053 568 ntBASIC5.21□□□□□ -1.58
TOP2BQ02880 AC104446.1-201ENST00000613728 1321 ntBASIC5.21□□□□□ -1.58
TOP2BQ02880 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC5.21□□□□□ -1.58
TOP2BQ02880 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TOP2BQ02880 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TOP2BQ02880 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TOP2BQ02880 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.2□□□□□ -1.58
TOP2BQ02880 RN7SKP222-201ENST00000410651 315 ntBASIC5.2□□□□□ -1.58
TOP2BQ02880 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.2□□□□□ -1.58
TOP2BQ02880 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.2□□□□□ -1.58
TOP2BQ02880 NPM1P13-201ENST00000452663 865 ntBASIC5.2□□□□□ -1.58
TOP2BQ02880 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.2□□□□□ -1.58
TOP2BQ02880 MIR2276-201ENST00000516886 89 ntBASIC5.2□□□□□ -1.58
TOP2BQ02880 AP001207.2-201ENST00000519490 539 ntBASIC5.2□□□□□ -1.58
TOP2BQ02880 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TOP2BQ02880 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.2□□□□□ -1.58
TOP2BQ02880 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.2□□□□□ -1.58
TOP2BQ02880 ATP1B3P1-201ENST00000605365 821 ntBASIC5.2□□□□□ -1.58
TOP2BQ02880 uc_338.1-201ENST00000612113 180 ntBASIC5.2□□□□□ -1.58
TOP2BQ02880 AC087241.4-201ENST00000612441 480 ntBASIC5.2□□□□□ -1.58
TOP2BQ02880 MIR7843-201ENST00000622274 79 ntBASIC5.2□□□□□ -1.58
TOP2BQ02880 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TOP2BQ02880 AL022311.1-201ENST00000623726 19416 ntBASIC5.2□□□□□ -1.58
TOP2BQ02880 AP003122.5-201ENST00000527668 3766 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms