Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.14□□□□□ -1.59
IRF9Q00978 DPPA2P2-201ENST00000418220 897 ntBASIC5.14□□□□□ -1.59
IRF9Q00978 CNOT7P2-201ENST00000441051 832 ntBASIC5.14□□□□□ -1.59
IRF9Q00978 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.14□□□□□ -1.59
IRF9Q00978 VN1R34P-201ENST00000447387 883 ntBASIC5.14□□□□□ -1.59
IRF9Q00978 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
IRF9Q00978 YWHAEP1-201ENST00000453697 763 ntBASIC5.14□□□□□ -1.59
IRF9Q00978 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.14□□□□□ -1.59
IRF9Q00978 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.14□□□□□ -1.59
IRF9Q00978 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.14□□□□□ -1.59
IRF9Q00978 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.14□□□□□ -1.59
IRF9Q00978 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.14□□□□□ -1.59
IRF9Q00978 AC100832.1-201ENST00000471945 383 ntBASIC5.14□□□□□ -1.59
IRF9Q00978 PTGES3P3-201ENST00000511479 482 ntBASIC5.14□□□□□ -1.59
IRF9Q00978 ARL2BPP6-201ENST00000512757 439 ntBASIC5.14□□□□□ -1.59
IRF9Q00978 AC008549.1-201ENST00000512900 643 ntBASIC5.14□□□□□ -1.59
IRF9Q00978 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.14□□□□□ -1.59
IRF9Q00978 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.14□□□□□ -1.59
IRF9Q00978 AP003122.4-201ENST00000530980 758 ntBASIC5.14□□□□□ -1.59
IRF9Q00978 AC027544.3-201ENST00000535082 757 ntBASIC5.14□□□□□ -1.59
IRF9Q00978 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.14□□□□□ -1.59
IRF9Q00978 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.14□□□□□ -1.59
IRF9Q00978 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.14□□□□□ -1.59
IRF9Q00978 NRBF2P1-201ENST00000587407 859 ntBASIC5.14□□□□□ -1.59
IRF9Q00978 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.14□□□□□ -1.59
IRF9Q00978 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.14□□□□□ -1.59
IRF9Q00978 MEMO1P5-201ENST00000604810 406 ntBASIC5.14□□□□□ -1.59
IRF9Q00978 AC126175.1-201ENST00000617041 758 ntBASIC5.14□□□□□ -1.59
IRF9Q00978 MIR6864-201ENST00000617935 70 ntBASIC5.14□□□□□ -1.59
IRF9Q00978 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.14□□□□□ -1.59
IRF9Q00978 MIR3688-2-201ENST00000636963 87 ntBASIC5.14□□□□□ -1.59
IRF9Q00978 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.14□□□□□ -1.59
IRF9Q00978 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.14□□□□□ -1.59
IRF9Q00978 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
IRF9Q00978 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
IRF9Q00978 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
IRF9Q00978 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
IRF9Q00978 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
IRF9Q00978 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
IRF9Q00978 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
IRF9Q00978 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
IRF9Q00978 AC092747.4-201ENST00000620519 1861 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.13□□□□□ -1.59
IRF9Q00978 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
IRF9Q00978 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
IRF9Q00978 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
IRF9Q00978 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
IRF9Q00978 AC130650.2-201ENST00000618736 2403 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
IRF9Q00978 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
IRF9Q00978 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
IRF9Q00978 CR848007.1-201ENST00000442354 1699 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 U8.3-201ENST00000363321 132 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 RN7SKP124-201ENST00000364730 341 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 RNA5SP90-201ENST00000364801 99 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
IRF9Q00978 Y_RNA.390-201ENST00000383932 102 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 Y_RNA.450-201ENST00000384198 113 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 RNU6-1226P-201ENST00000384317 107 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 RNA5SP339-201ENST00000390987 122 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 MTCO3P40-201ENST00000392516 676 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 RPS20P2-201ENST00000402520 389 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 AL590002.1-201ENST00000406554 418 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 MIR1277-201ENST00000408536 78 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 AC009302.1-201ENST00000417147 390 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 AC073136.2-201ENST00000417282 849 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 BX295541.1-201ENST00000417774 250 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 AC104333.2-201ENST00000422630 192 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 AC009480.2-201ENST00000422916 432 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 CHEK2P5-201ENST00000423877 246 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.13□□□□□ -1.59
IRF9Q00978 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.13□□□□□ -1.59
IRF9Q00978 AL358934.1-201ENST00000432346 324 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 AL451074.3-201ENST00000437709 472 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.13□□□□□ -1.59
IRF9Q00978 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.13□□□□□ -1.59
IRF9Q00978 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.13□□□□□ -1.59
IRF9Q00978 SBDSP1-204ENST00000453858 737 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.13□□□□□ -1.59
IRF9Q00978 APOOP2-201ENST00000461561 539 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 PABPC1P3-201ENST00000469174 459 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.13□□□□□ -1.59
IRF9Q00978 AC013356.1-201ENST00000489027 564 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.13□□□□□ -1.59
IRF9Q00978 FCF1P3-201ENST00000496394 590 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 KCTD9P5-201ENST00000504141 1170 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.13□□□□□ -1.59
IRF9Q00978 AC093824.1-201ENST00000508796 343 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 AC010342.1-201ENST00000514047 877 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.13□□□□□ -1.59
IRF9Q00978 AC104057.1-201ENST00000515547 497 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.13□□□□□ -1.59
IRF9Q00978 CENPUP2-201ENST00000555897 1186 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.13□□□□□ -1.59
IRF9Q00978 AC006504.3-201ENST00000586818 523 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 HMGN1P30-201ENST00000589286 268 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 SUGT1P3-202ENST00000604259 383 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 AC104695.2-201ENST00000605056 775 ntBASIC5.13□□□□□ -1.59
IRF9Q00978 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.13□□□□□ -1.59
IRF9Q00978 AC004067.1-201ENST00000608733 700 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms