Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC121761.2-201ENST00000617300 689 ntBASIC3.14□□□□□ -1.91
H3F3AP84243 AC006065.5-201ENST00000623427 349 ntBASIC3.14□□□□□ -1.91
H3F3AP84243 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.14□□□□□ -1.91
H3F3AP84243 AC244258.1-201ENST00000637553 1071 ntBASIC3.14□□□□□ -1.91
H3F3AP84243 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.14□□□□□ -1.91
H3F3AP84243 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
H3F3AP84243 NMD3P1-201ENST00000439704 1488 ntBASIC3.14□□□□□ -1.91
H3F3AP84243 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
H3F3AP84243 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
H3F3AP84243 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
H3F3AP84243 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
H3F3AP84243 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
H3F3AP84243 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
H3F3AP84243 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.13□□□□□ -1.91
H3F3AP84243 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
H3F3AP84243 FRG1CP-201ENST00000358464 769 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 RNU6-666P-201ENST00000363499 107 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 RNA5SP235-201ENST00000365411 114 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.13□□□□□ -1.91
H3F3AP84243 AC068533.1-201ENST00000418542 415 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.13□□□□□ -1.91
H3F3AP84243 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
H3F3AP84243 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.13□□□□□ -1.91
H3F3AP84243 AC091286.1-201ENST00000431233 461 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 USP9YP31-201ENST00000431405 881 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 ATP5JP1-201ENST00000431631 322 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 GOT2P5-201ENST00000433995 546 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 RPS29P31-201ENST00000446147 164 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 RPL21P23-201ENST00000446654 460 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 HMGN2P21-201ENST00000447764 270 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 PPIAP3-201ENST00000450588 505 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 RPL12P26-201ENST00000452430 487 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.13□□□□□ -1.91
H3F3AP84243 SNORA84-201ENST00000459229 133 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.13□□□□□ -1.91
H3F3AP84243 RPL23AP44-201ENST00000482216 473 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.13□□□□□ -1.91
H3F3AP84243 RPL5P23-201ENST00000496040 868 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.13□□□□□ -1.91
H3F3AP84243 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 AC008083.2-201ENST00000546707 476 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.13□□□□□ -1.91
H3F3AP84243 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.13□□□□□ -1.91
H3F3AP84243 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
H3F3AP84243 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.13□□□□□ -1.91
H3F3AP84243 AC022149.2-201ENST00000621061 203 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 U4.6-201ENST00000621618 127 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 AC243312.2-201ENST00000623340 601 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
H3F3AP84243 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.13□□□□□ -1.91
H3F3AP84243 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
H3F3AP84243 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
H3F3AP84243 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
H3F3AP84243 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.13□□□□□ -1.91
H3F3AP84243 AL356274.2-201ENST00000624379 3752 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
H3F3AP84243 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
H3F3AP84243 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
H3F3AP84243 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
H3F3AP84243 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
H3F3AP84243 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
H3F3AP84243 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
H3F3AP84243 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
H3F3AP84243 SNORA62.3-201ENST00000365110 153 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 MIR200C-201ENST00000384980 68 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 AC004022.2-201ENST00000413824 193 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.12□□□□□ -1.91
H3F3AP84243 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.12□□□□□ -1.91
H3F3AP84243 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.12□□□□□ -1.91
H3F3AP84243 UBE2V2P1-201ENST00000434717 398 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.12□□□□□ -1.91
H3F3AP84243 AP002884.2-201ENST00000471647 395 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 CYCSP20-201ENST00000473154 315 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 RPL21P103-201ENST00000479921 488 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 ACTG1P13-201ENST00000486987 1043 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.12□□□□□ -1.91
H3F3AP84243 AP002812.1-201ENST00000495378 474 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 AC110768.1-201ENST00000509222 400 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.12□□□□□ -1.91
H3F3AP84243 PHBP14-201ENST00000512887 367 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 OR4A2P-201ENST00000527276 913 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.12□□□□□ -1.91
H3F3AP84243 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.12□□□□□ -1.91
H3F3AP84243 OR5B10P-201ENST00000532869 642 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 AP004242.1-201ENST00000533701 349 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.12□□□□□ -1.91
H3F3AP84243 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.12□□□□□ -1.91
H3F3AP84243 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.12□□□□□ -1.91
H3F3AP84243 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.12□□□□□ -1.91
H3F3AP84243 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
H3F3AP84243 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.12□□□□□ -1.91
H3F3AP84243 BNIP3P38-201ENST00000601117 544 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.12□□□□□ -1.91
H3F3AP84243 AC105429.2-201ENST00000610567 517 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.12□□□□□ -1.91
H3F3AP84243 AC015726.3-201ENST00000624501 418 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.12□□□□□ -1.91
H3F3AP84243 AL353743.4-201ENST00000422653 1547 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 AC000367.1-201ENST00000452711 1766 ntBASIC3.12□□□□□ -1.91
H3F3AP84243 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms