Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.16□□□□□ -1.9
LSM6P62312 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.16□□□□□ -1.9
LSM6P62312 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM6P62312 HIGD1AP18-201ENST00000520730 278 ntBASIC3.16□□□□□ -1.9
LSM6P62312 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.16□□□□□ -1.9
LSM6P62312 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM6P62312 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM6P62312 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.16□□□□□ -1.9
LSM6P62312 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.16□□□□□ -1.9
LSM6P62312 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LSM6P62312 AC069304.3-201ENST00000603938 1084 ntBASIC3.16□□□□□ -1.9
LSM6P62312 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.16□□□□□ -1.9
LSM6P62312 AC006023.2-201ENST00000609916 167 ntBASIC3.16□□□□□ -1.9
LSM6P62312 AC024941.1-201ENST00000612250 334 ntBASIC3.16□□□□□ -1.9
LSM6P62312 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.16□□□□□ -1.9
LSM6P62312 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.16□□□□□ -1.9
LSM6P62312 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.16□□□□□ -1.9
LSM6P62312 AL672296.1-201ENST00000427780 2158 ntBASIC3.16□□□□□ -1.9
LSM6P62312 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
LSM6P62312 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.16□□□□□ -1.9
LSM6P62312 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
LSM6P62312 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LSM6P62312 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSM6P62312 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LSM6P62312 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LSM6P62312 AC092326.2-201ENST00000624772 1561 ntBASIC3.16□□□□□ -1.9
LSM6P62312 MFSD8-233ENST00000641482 4860 ntBASIC3.16□□□□□ -1.9
LSM6P62312 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LSM6P62312 AL353746.1-201ENST00000566293 6881 ntBASIC3.15□□□□□ -1.9
LSM6P62312 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LSM6P62312 AC026951.1-201ENST00000559530 2459 ntBASIC3.15□□□□□ -1.9
LSM6P62312 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.15□□□□□ -1.9
LSM6P62312 PWAR6-201ENST00000552334 4618 ntBASIC3.15□□□□□ -1.91
LSM6P62312 RN7SKP280-201ENST00000364196 304 ntBASIC3.15□□□□□ -1.91
LSM6P62312 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.15□□□□□ -1.91
LSM6P62312 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.15□□□□□ -1.91
LSM6P62312 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.15□□□□□ -1.91
LSM6P62312 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.15□□□□□ -1.91
LSM6P62312 MTCO1P43-201ENST00000431831 488 ntBASIC3.15□□□□□ -1.91
LSM6P62312 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.15□□□□□ -1.91
LSM6P62312 RPS3AP46-201ENST00000448352 682 ntBASIC3.15□□□□□ -1.91
LSM6P62312 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.15□□□□□ -1.91
LSM6P62312 RPL12P26-201ENST00000452430 487 ntBASIC3.15□□□□□ -1.91
LSM6P62312 HMGB1P26-201ENST00000452520 628 ntBASIC3.15□□□□□ -1.91
LSM6P62312 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.15□□□□□ -1.91
LSM6P62312 RN7SL594P-201ENST00000470590 287 ntBASIC3.15□□□□□ -1.91
LSM6P62312 AC007688.1-201ENST00000475592 759 ntBASIC3.15□□□□□ -1.91
LSM6P62312 AC068587.1-201ENST00000483613 781 ntBASIC3.15□□□□□ -1.91
LSM6P62312 ACTG1P13-201ENST00000486987 1043 ntBASIC3.15□□□□□ -1.91
LSM6P62312 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.15□□□□□ -1.91
LSM6P62312 AC090071.1-201ENST00000507713 644 ntBASIC3.15□□□□□ -1.91
LSM6P62312 PRELID3BP5-201ENST00000508612 460 ntBASIC3.15□□□□□ -1.91
LSM6P62312 RNU6-1004P-201ENST00000516584 111 ntBASIC3.15□□□□□ -1.91
LSM6P62312 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.15□□□□□ -1.91
LSM6P62312 AP006245.1-201ENST00000522549 120 ntBASIC3.15□□□□□ -1.91
LSM6P62312 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.15□□□□□ -1.91
LSM6P62312 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.15□□□□□ -1.91
LSM6P62312 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LSM6P62312 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.15□□□□□ -1.91
LSM6P62312 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.15□□□□□ -1.91
LSM6P62312 AC010615.3-201ENST00000597319 394 ntBASIC3.15□□□□□ -1.91
LSM6P62312 SNORA51-201ENST00000606420 132 ntBASIC3.15□□□□□ -1.91
LSM6P62312 AL391497.1-201ENST00000608671 547 ntBASIC3.15□□□□□ -1.91
LSM6P62312 AC068831.8-201ENST00000620171 435 ntBASIC3.15□□□□□ -1.91
LSM6P62312 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.15□□□□□ -1.91
LSM6P62312 AC068647.1-201ENST00000489539 2265 ntBASIC3.15□□□□□ -1.91
LSM6P62312 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.15□□□□□ -1.91
LSM6P62312 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
LSM6P62312 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LSM6P62312 AC116096.1-201ENST00000566804 2314 ntBASIC3.15□□□□□ -1.91
LSM6P62312 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
LSM6P62312 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LSM6P62312 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
LSM6P62312 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LSM6P62312 AL161912.2-201ENST00000565707 3007 ntBASIC3.14□□□□□ -1.91
LSM6P62312 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LSM6P62312 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
LSM6P62312 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.14□□□□□ -1.91
LSM6P62312 AC007656.2-201ENST00000624902 4547 ntBASIC3.14□□□□□ -1.91
LSM6P62312 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LSM6P62312 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
LSM6P62312 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LSM6P62312 RNA5SP515-201ENST00000364570 118 ntBASIC3.14□□□□□ -1.91
LSM6P62312 U8.11-201ENST00000384699 133 ntBASIC3.14□□□□□ -1.91
LSM6P62312 U8.12-201ENST00000384701 133 ntBASIC3.14□□□□□ -1.91
LSM6P62312 SNORA57.1-201ENST00000391227 145 ntBASIC3.14□□□□□ -1.91
LSM6P62312 AC007066.1-201ENST00000392902 381 ntBASIC3.14□□□□□ -1.91
LSM6P62312 DNAJC19P6-201ENST00000401853 280 ntBASIC3.14□□□□□ -1.91
LSM6P62312 ATP5A1P2-201ENST00000412323 255 ntBASIC3.14□□□□□ -1.91
LSM6P62312 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.14□□□□□ -1.91
LSM6P62312 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LSM6P62312 RPL37P3-201ENST00000456825 293 ntBASIC3.14□□□□□ -1.91
LSM6P62312 SNORD105B-201ENST00000458770 79 ntBASIC3.14□□□□□ -1.91
LSM6P62312 U8.18-201ENST00000459285 133 ntBASIC3.14□□□□□ -1.91
LSM6P62312 AC084357.1-201ENST00000473404 255 ntBASIC3.14□□□□□ -1.91
LSM6P62312 AC091959.2-201ENST00000477363 321 ntBASIC3.14□□□□□ -1.91
LSM6P62312 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.14□□□□□ -1.91
LSM6P62312 SETP14-201ENST00000497538 873 ntBASIC3.14□□□□□ -1.91
LSM6P62312 AC021146.7-201ENST00000509604 775 ntBASIC3.14□□□□□ -1.91
LSM6P62312 AC005351.1-201ENST00000511152 786 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms