Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 RNU6-433P-201ENST00000363216 104 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 Y_RNA.248-201ENST00000364501 109 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 RPL23AP29-201ENST00000397284 453 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AL589647.1-201ENST00000402485 466 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AL391361.1-201ENST00000405580 489 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 OR8G2P-201ENST00000412796 908 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 BMS1P17-202ENST00000416720 316 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC007559.1-201ENST00000428736 355 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC005033.1-201ENST00000428904 813 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AL139415.2-201ENST00000431968 163 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC093414.1-201ENST00000434712 514 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 SUMO2P3-201ENST00000438311 288 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 RPS29P10-201ENST00000439197 166 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC005297.1-201ENST00000444765 862 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 YWHAQP9-201ENST00000445891 512 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 RPL7P59-201ENST00000447700 943 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 DNAJC19P1-201ENST00000455312 319 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AL133445.1-201ENST00000467051 452 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC010307.1-201ENST00000467206 836 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 RPS26P28-201ENST00000470806 348 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 SIAH1P1-201ENST00000479411 923 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC090013.1-201ENST00000485147 480 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC146944.2-203ENST00000502493 354 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC139495.1-202ENST00000513164 354 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 MED28P5-201ENST00000528254 438 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 TRAV15-201ENST00000556680 249 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC084757.1-201ENST00000559987 490 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC009063.1-201ENST00000563342 702 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 MIR1273E-201ENST00000581165 102 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 MIR548AB-201ENST00000584917 84 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 ELOCP28-201ENST00000590044 317 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AL606834.2-201ENST00000602954 668 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC025946.2-201ENST00000603398 234 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC024941.1-201ENST00000612250 334 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AL589743.7-201ENST00000612637 233 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC023509.5-201ENST00000617434 807 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 HOTTIP_3.1-201ENST00000619957 337 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC107982.1-201ENST00000507171 1300 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AC074029.4-201ENST00000624796 1859 ntBASIC3.83□□□□□ -1.8
ERVFC1-1P60608 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ERVFC1-1P60608 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
ERVFC1-1P60608 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
ERVFC1-1P60608 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ERVFC1-1P60608 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ERVFC1-1P60608 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC3.82□□□□□ -1.8
ERVFC1-1P60608 DHX9P1-201ENST00000436565 3076 ntBASIC3.82□□□□□ -1.8
ERVFC1-1P60608 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.82□□□□□ -1.8
ERVFC1-1P60608 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.82□□□□□ -1.8
ERVFC1-1P60608 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ERVFC1-1P60608 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
ERVFC1-1P60608 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
ERVFC1-1P60608 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ERVFC1-1P60608 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ERVFC1-1P60608 MTCO1P23-201ENST00000415223 1526 ntBASIC3.82□□□□□ -1.8
ERVFC1-1P60608 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ERVFC1-1P60608 TEX21P-201ENST00000447107 1476 ntBASIC3.82□□□□□ -1.8
ERVFC1-1P60608 AC135352.1-201ENST00000506173 1418 ntBASIC3.82□□□□□ -1.8
ERVFC1-1P60608 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ERVFC1-1P60608 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ERVFC1-1P60608 RNA5SP52-201ENST00000362448 134 ntBASIC3.82□□□□□ -1.8
ERVFC1-1P60608 RNY4P24-201ENST00000362735 96 ntBASIC3.82□□□□□ -1.8
ERVFC1-1P60608 RN7SKP160-201ENST00000363804 340 ntBASIC3.82□□□□□ -1.8
ERVFC1-1P60608 RNA5SP88-201ENST00000365560 109 ntBASIC3.82□□□□□ -1.8
ERVFC1-1P60608 RHOT1P2-201ENST00000366423 333 ntBASIC3.82□□□□□ -1.8
ERVFC1-1P60608 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms